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As machine learning becomes more pervasive, there is an urgent need for interpretable explanations of predictive models. Prior work has developed effective methods for visualizing global model behavior, as well as generating local…
Summary: Ancestral recombination graphs (ARGs) are a complete representation of the genetic relationships between recombining lineages and are of central importance in population genetics. Recent breakthroughs in simulation and inference…
The need to visualize large social networks is growing as hardware capabilities make analyzing large networks feasible and many new data sets become available. Unfortunately, the visualizations in existing systems do not satisfactorily…
An efficient structural identifiability analysis algorithm is developed in this study for a broad range of network structures. The proposed method adopts the Wright's path coefficient method to generate identifiability equations in forms of…
Point cloud analysis without pose priors is very challenging in real applications, as the orientations of point clouds are often unknown. In this paper, we propose a brand new point-set learning framework PRIN, namely, Point-wise Rotation…
Network theorists have developed methods to characterize the complex interactions in natural phenomena. The structure of the network of interactions between proteins is important in the field of proteomics, and has been subject to intensive…
We present vivid, an R package for visualizing variable importance and variable interactions in machine learning models. The package provides a range of displays including heatmap and graph-based displays for viewing variable importance and…
In a Wireless Sensor Network (WSN), data manipulation and representation is a crucial part and can take a lot of time to be developed from scratch. Although various visualization tools have been created for certain projects so far, these…
Interconnection networks, or `interconnects,' play a crucial role in administering the communication among computing units of high-performance computing (HPC) systems. Efficient provisioning of interconnects minimizes the processing delay…
IVISIT is a generic interactive visual simulation tool that is based on Python/Numpy and can be used for system simulation, parameter optimization, parameter management, and visualization of system dynamics as required, for example,for…
The ever-growing datasets in observational astronomy have challenged scientists in many aspects, including an efficient and interactive data exploration and visualization. Many tools have been developed to confront this challenge. However,…
Segmenting unseen object instances in cluttered environments is an important capability that robots need when functioning in unstructured environments. While previous methods have exhibited promising results, they still tend to provide…
Digital Twins (DTs) systems are virtual representations of physical assets allowing organizations to gain insights and improve existing processes. In practice, DTs require proper modeling, coherent development and seamless deployment along…
The Roofline Model and its derivatives provide an intuitive representation of the best achievable performance on a given architecture. The Roofline Toolkit project is a collaboration among researchers at Argonne National Laboratory,…
Methods: We have developed a software suite (DataSet Tracker) for real-time analysis designed to run on computers, smartphones, and smart glasses hardware and suitable for resource-constrained, on-the-fly computing in microscopes without…
Most current neural networks for reconstructing surfaces from point clouds ignore sensor poses and only operate on raw point locations. Sensor visibility, however, holds meaningful information regarding space occupancy and surface…
We present SAInT, a Python-based tool for visually exploring and understanding the behavior of Machine Learning (ML) models through integrated local and global sensitivity analysis. Our system supports Human-in-the-Loop (HITL) workflows by…
The sheer amounts of biological data that are generated in recent years have driven the development of network analysis tools to facilitate the interpretation and representation of these data. A fundamental challenge in this domain is the…
Multivariate graphs are prolific across many fields, including transportation and neuroscience. A key task in graph analysis is the exploration of connectivity, to, for example, analyze how signals flow through neurons, or to explore how…
Representation learning using network embedding has received tremendous attention due to its efficacy to solve downstream tasks. Popular embedding methods (such as deepwalk, node2vec, LINE) are based on a neural architecture, thus unable to…