Related papers: On packing time-respecting arborescences
We introduce evolving networks where new vertices preferentially connect to the more central parts of a network. This makes such networks compact. Finite networks grown under the preferential compactness mechanism have complex…
Phylogenetic trees and networks are leaf-labelled graphs that are used to describe evolutionary histories of species. The Tree Containment problem asks whether a given phylogenetic tree is embedded in a given phylogenetic network. Given a…
The maximum/minimum bisection problems are, given an edge-weighted graph, to find a bipartition of the vertex set into two sets whose sizes differ by at most one, such that the total weight of edges between the two sets is…
In this paper we fix 7 types of undirected graphs: paths, paths with prescribed endvertices, circuits, forests, spanning trees, (not necessarily spanning) trees and cuts. Given an undirected graph $G=(V,E)$ and two "object types"…
It is required to find an optimal order of constructing the edges of a network so as to minimize the sum of the weighted connection times of relevant pairs of vertices. Construction can be performed anytime anywhere in the network, with a…
This paper revisits two classical distributed problems in anonymous networks, namely spanning tree construction and topology recognition, from the point of view of graph covering theory. For both problems, we characterize necessary and…
In the paper very efficient, linear in number of arcs, algorithms for determining Hummon and Doreian's arc weights SPLC and SPNP in citation network are proposed, and some theoretical properties of these weights are presented. The…
Transport networks are crucial to the functioning of natural and technological systems. Nature features transport networks that are adaptive over a vast range of parameters, thus providing an impressive level of robustness in supply.…
We study the satisfiability problem for the two-variable first-order logic over structures with one transitive relation. % We show that the problem is decidable in 2-NExpTime for the fragment consisting of formulas where existential…
In this paper, we characterize a mixed graph $F$ which contains $k$ edge and arc disjoint spanning mixed arborescences $F_{1}, \ldots, F_{k}$, such that for each $v \in V(F)$, the cardinality of $\{i \in [k]: v \text{ is the root of }…
We show that the query containment problem for monadic datalog on finite unranked labeled trees can be solved in 2-fold exponential time when (a) considering unordered trees using the axes child and descendant, and when (b) considering…
Recursive Conditioning (RC) was introduced recently as the first any-space algorithm for inference in Bayesian networks which can trade time for space by varying the size of its cache at the increment needed to store a floating point…
'Tree-based' phylogenetic networks proposed by Francis and Steel have attracted much attention of theoretical biologists in the last few years. At the heart of the definitions of tree-based phylogenetic networks is the notion of 'support…
In a previous work, we gave a metric on the class of semibinary tree-sibling time consistent phylogenetic networks that is computable in polynomial time; in particular, the problem of deciding if two networks of this kind are isomorphic is…
We propose and implement a method to analyze time series with a neural network using a matrix of area-normalized persistence landscapes obtained through topological data analysis. We include a gating layer in the network's architecture that…
Packing problems are an important class of optimization problems. The probably most well-known problem if this type is knapsack and many generalizations of it have been studied in the literature like Two-dimensional Geometric Knapsack…
We study the crossing-minimization problem in a layered graph drawing of planar-embedded rooted trees whose leaves have a given total order on the first layer, which adheres to the embedding of each individual tree. The task is then to…
Trees with many leaves have applications on broadcasting, which is a method in networks for transferring a message to all recipients simultaneously. Internal nodes of a broadcasting tree require more expensive technology, because they have…
We show that the spanning tree congestion problem is NP-complete even for proper interval graphs of linear clique-width at most 4.
Recently Kubica et al. (Inf. Process. Let., 2013) and Kim et al. (submitted to Theor. Comp. Sci.) introduced order-preserving pattern matching. In this problem we are looking for consecutive substrings of the text that have the same "shape"…