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Seven rotational and fine-structure transitions of the deuterated molecular ion SD+ in the X 3S- ground electronic state have been measured in the 271-863 GHz region in the laboratory. This ion has been produced by DC-glow discharge using a…

Astrophysics of Galaxies · Physics 2024-03-25 Mitsunori Araki , Valerio Lattanzi , Christian P. Endres , Paula Caselli

DNA-based storage is an emerging storage technology that provides high information density and long duration. Due to the physical constraints in the reading and writing processes, error correction in DNA storage poses several interesting…

Information Theory · Computer Science 2023-10-04 Jin Sima , Netanel Raviv , Moshe Schwartz , Jehoshua Bruck

Nanopore membranes are a versatile platform for a wide range of applications ranging from medical sensing to filtration and clean energy generation. To attain high-flux rectifying ionic flow, it is required to produce short channels…

Mesoscale and Nanoscale Physics · Physics 2023-05-12 Alexander Kiy , Shankar Dutt , Christian Notthoff , Maria E. Toimil-Molares , Nigel Kirby , Patrick Kluth

This paper describes a novel approach to synthesize molecular reactions to train a perceptron, i.e., a single-layered neural network, with sigmoidal activation function. The approach is based on fractional coding where a variable is…

Emerging Technologies · Computer Science 2020-04-01 Xingyi Liu , Keshab K. Parhi

We present a short review of various experiments that measure charge transfer and charge transport in DNA. Some general comments are made on the possible connection between 'chemistry-style' charge transfer experiments that probe…

Disordered Systems and Neural Networks · Physics 2009-11-10 N. P. Armitage , M. Briman , G. Gruner

Radiation damage is considered to be the major problem that still prevents imaging an individual biological molecule for structural analysis. So far, all known mapping techniques using sufficient short wave-length radiation, be it X-rays or…

Biological Physics · Physics 2010-10-28 Matthias Germann , Tatiana Latychevskaia , Conrad Escher , Hans-Werner Fink

Purpose: To present a closed formalism calculating charged particle radiation damage induced in DNA. The formalism is valid for all types of charged particles and due to its closed nature is suited to provide fast conversion of dose to…

Medical Physics · Physics 2016-04-13 Frank Van den Heuvel

Oxidative DNA single strand breaks arise continuously in cells and defects in their repair have been implicated in neurological disease. While much progress has been made in understanding how chromosomal single strand breaks are repaired…

Subcellular Processes · Quantitative Biology 2012-02-03 Arman Nabatiyan , Zhihong Zeng , Keith W. Caldecott

With the rapid increase of available digital data, DNA storage is identified as a storage media with high density and capability of long-term preservation, especially for archival storage systems. However, the encoding density (i.e., how…

Emerging Technologies · Computer Science 2021-08-26 Bingzhe Li , Li Ou , David Du

Complex systems with nonlinear response mechanisms can be applied as reservoir computers for energy-efficient machine learning tasks. Historically explored at the macro- and meso-scale, physical reservoir computing has recently been…

Disordered Systems and Neural Networks · Physics 2026-02-23 Guy Greenbaum , Will R. Branford , Andrew L. Goodwin

The scientific community shows a great interest in the study of DNA damage induction, DNA damage repair and the biological effects on cells and cellular systems after exposure to ionizing radiation. Several in-silico methods have been…

We present a silicon optomechanical nanobeam design with a dynamically tunable acoustic mode at 10.2 GHz. The resonance frequency can be shifted by 90 kHz/V^2 with an on-chip capacitor that was optimized to exert forces up to 1 $\mu$N at 10…

Optics · Physics 2016-05-19 Hannes Pfeifer , Taofiq Paraiso , Leyun Zang , Oskar Painter

A solid-state nanopore can electrophoretically capture a DNA molecule and pull it through in a folded configuration. The resulting ionic current signal indicates where along its length the DNA was captured. A statistical study using an 8 nm…

Biological Physics · Physics 2015-06-11 Mirna Mihovilovic , Nick Hagerty , Derek Stein

Genetic information is stored in a linear sequence of base-pairs; however, thermal fluctuations and complex DNA conformations such as folds and loops make it challenging to order genomic material for in vitro analysis. In this work, we…

Dynamics of the polymorphic A<->B transitions in DNA is compared for two polypurine sequences, poly(dA).poly(dT) and poly(dG).poly(dC), long known to exhibit contrasting properties in experiments. In free molecular dynamics simulations…

Biomolecules · Quantitative Biology 2007-05-23 Alexey K. Mazur

Extremely long coherence times, excellent single-qubit gate fidelities and two-qubit logic have been demonstrated with silicon metal-oxide-semiconductor spin qubits, making it one of the leading platforms for quantum information processing.…

Mesoscale and Nanoscale Physics · Physics 2020-01-14 H. G. J. Eenink , L. Petit , W. I. L. Lawrie , J. S. Clarke , L. M. K. Vandersypen , M. Veldhorst

An ideal nanofabrication method should allow the organization of nanoparticles and molecules with nanometric positional precision, stoichiometric control and well-defined orientation. The DNA origami technique has evolved into a highly…

Resistive random access memories are promising for non-volatile memory and brain-inspired computing applications. High variability and low yield of these devices are key drawbacks hindering reliable training of physical neural networks. In…

Materials Science · Physics 2021-05-04 Zheng Jie Tan , Vrindaa Somjit , Cigdem Toparli , Bilge Yildiz , Nicholas Fang

Atomically thin semiconductors exhibit tunable exciton resonances that can be harnessed for dynamic manipulation of visible light in ultra-compact metadevices. However, the rapid nonradiative decay and dephasing of excitons at room…

Optics · Physics 2025-02-18 Tom Hoekstra , Jorik van de Groep

We propose a dynamical model for the secondary structure of DNA, which is based on the finite stacking enthalpies used in thermodynamics calculations. In this model, the two strands can separate and the bases are allowed to rotate…

Biological Physics · Physics 2016-08-16 Sahin Buyukdagli , Michaël Sanrey , Marc Joyeux
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