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Related papers: Parthenon -- a performance portable block-structur…

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Hero-class HPC simulations rely on Adaptive Mesh Refinement (AMR) to reduce compute and memory demands while maintaining accuracy. This work analyzes the performance of Parthenon, a block-structured AMR benchmark, on CPU-GPU systems. We…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-25 Akash Poptani , Alireza Khadem , Scott Mahlke , Jonah Miller , Joshua Dolence , Reetuparna Das

We describe AthenaK: a new implementation of the Athena++ block-based adaptive mesh refinement (AMR) framework using the Kokkos programming model. Finite volume methods for Newtonian, special relativistic (SR), and general relativistic (GR)…

Instrumentation and Methods for Astrophysics · Physics 2024-09-25 James M. Stone , Patrick D. Mullen , Drummond Fielding , Philipp Grete , Minghao Guo , Philipp Kempski , Elias R. Most , Christopher J. White , George N. Wong

The design and implementation of a new framework for adaptive mesh refinement (AMR) calculations is described. It is intended primarily for applications in astrophysical fluid dynamics, but its flexible and modular design enables its use…

Instrumentation and Methods for Astrophysics · Physics 2020-07-08 James M. Stone , Kengo Tomida , Christopher J. White , Kyle G. Felker

Large scale simulations are a key pillar of modern research and require ever-increasing computational resources. Different novel manycore architectures have emerged in recent years on the way towards the exascale era. Performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-17 Philipp Grete , Forrest W. Glines , Brian W. O'Shea

Block-structured adaptive mesh refinement (AMR) provides the basis for the temporal and spatial discretization strategy for a number of ECP applications in the areas of accelerator design, additive manufacturing, astrophysics, combustion,…

Mathematical Software · Computer Science 2025-03-21 Weiqun Zhang , Andrew Myers , Kevin Gott , Ann Almgren , John Bell

In this article, we present a novel approach for block-structured adaptive mesh refinement (AMR) that is suitable for extreme-scale parallelism. All data structures are designed such that the size of the meta data in each distributed…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-24 Florian Schornbaum , Ulrich Rüde

Optimizing scientific applications to take full advan-tage of modern memory subsystems is a continual challenge forapplication and compiler developers. Factors beyond working setsize affect performance. A benchmark framework that…

Performance · Computer Science 2018-12-20 Mahesh Lakshminarasimhan , Catherine Olschanowsky

This paper presents a heterogeneous adaptive mesh refinement (AMR) framework for efficient simulation of moderately stiff reactive problems. This framework features an elaborate subcycling-in-time algorithm along with a specialized…

Computational Physics · Physics 2025-06-04 Yuqi Wang , Yadong Zeng , Ralf Deiterding , Jianhan Liang

GPUs and other accelerators are increasingly used for scientific computing. In the future, we want to add GPU support to parallel adaptive mesh refinement (AMR) codes written in Fortran. To understand which changes are necessary to obtain…

We describe the implementation of multigrid solvers in the Athena++ adaptive mesh refinement (AMR) framework and their application to the solution of the Poisson equation for self-gravity. The new solvers are built on top of the AMR…

Instrumentation and Methods for Astrophysics · Physics 2023-05-03 Kengo Tomida , James M. Stone

The exascale race is at an end with the announcement of the Aurora and Frontier machines. This next generation of supercomputers utilize diverse hardware architectures to achieve their compute performance, providing an added onus on the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-26 Rahulkumar Gayatri , Stan Moore , Evan Weinberg , Nicholas Lubbers , Sarah Anderson , Jack Deslippe , Danny Perez , Aidan P. Thompson

Scalable and efficient numerical simulations continue to gain importance, as computation is firmly established as the third pillar of discovery, alongside theory and experiment. Meanwhile, the performance of computing hardware grows through…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-26 Pietro Incardona , Antonio Leo , Yaroslav Zaluzhnyi , Rajesh Ramaswamy , Ivo F. Sbalzarini

In this work, we revisit the marking decisions made in the standard adaptive finite element method (AFEM). Experience shows that a na\"{i}ve marking policy leads to inefficient use of computational resources for adaptive mesh refinement…

Numerical Analysis · Mathematics 2023-12-27 Andrew Gillette , Brendan Keith , Socratis Petrides

Adaptive mesh refinement (AMR) is a classical technique about local refinement in space where needed, thus effectively reducing computational costs for HPC-based physics simulations. Although AMR has been used for many years, little…

Fluid Dynamics · Physics 2024-05-14 Dewen Liu , Shuai He , Haoran Cheng , Yadong Zeng

Adaptive Mesh Refinement (AMR) enables efficient computation of flows by providing high resolution in critical regions while allowing for coarsening in areas where fine detail is unnecessary. While early AMR software packages relied solely…

Computational Physics · Physics 2025-02-26 Khodr Jaber , Ebenezer Essel , Pierre Sullivan

Mesh generation is essential for accurate and efficient computational fluid dynamics simulations. To resolve critical features in the flow, adaptive mesh refinement (AMR) is routinely employed in certain regions of the computational domain,…

Fluid Dynamics · Physics 2024-12-02 Yongzheng Zhu , Shiji Zhao , Yuanye Zhou , Hong Liang , Xin Bian

Inference-time techniques, such as repeated sampling or iterative revisions, are emerging as powerful ways to enhance large-language models (LLMs) at test time. However, best practices for developing systems that combine these techniques…

Hardware heterogeneity is here to stay for high-performance computing. Large-scale systems are currently equipped with multiple GPU accelerators per compute node and are expected to incorporate more specialized hardware. This shift in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-03-09 Polykarpos Thomadakis , Nikos Chrisochoides

This article presents a hardware architecture independent implementation of an adaptive mesh refinement Poisson solver that is integrated into the electrostatic Particle-In-Cell beam dynamics code OPAL. The Poisson solver is solely based on…

Computational Physics · Physics 2020-09-03 Matthias Frey , Andreas Adelmann , Uldis Locans

State-of-the-art Transformer-based models, with gigantic parameters, are difficult to be accommodated on resource constrained embedded devices. Moreover, with the development of technology, more and more embedded devices are available to…

Machine Learning · Computer Science 2021-10-20 Panjie Qi , Edwin Hsing-Mean Sha , Qingfeng Zhuge , Hongwu Peng , Shaoyi Huang , Zhenglun Kong , Yuhong Song , Bingbing Li
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