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Networks are a commonly used mathematical model to describe the rich set of interactions between objects of interest. Many clustering methods have been developed in order to partition such structures, among which several rely on underlying…

Methodology · Statistics 2014-05-13 P. Latouche , E. Birmelé , C. Ambroise

Bayesian model comparison (BMC) offers a principled probabilistic approach to study and rank competing models. In standard BMC, we construct a discrete probability distribution over the set of possible models, conditional on the observed…

Machine Learning · Statistics 2023-02-22 Marvin Schmitt , Stefan T. Radev , Paul-Christian Bürkner

In many domains, we are interested in analyzing the structure of the underlying distribution, e.g., whether one variable is a direct parent of the other. Bayesian model-selection attempts to find the MAP model and use its structure to…

Machine Learning · Computer Science 2013-01-18 Nir Friedman , Daphne Koller

Tree-based priors for probability distributions are usually specified using a predetermined, data-independent collection of candidate recursive partitions of the sample space. To characterize an unknown target density in detail over the…

Methodology · Statistics 2025-04-14 Li Ma , Benedetta Bruni

When performing causal discovery, assumptions have to be made on how the true causal mechanism corresponds to the underlying joint probability distribution. These assumptions are labeled as causal razors in this work. We review numerous…

Machine Learning · Computer Science 2023-08-09 Wai-yin Lam

Bayes factor, defined as the ratio of the marginal likelihood functions of two competing models, is the natural Bayesian procedure for model selection. Marginal likelihoods are usually computationally demanding and complex. This scenario is…

Methodology · Statistics 2022-09-09 Gabriel Calvo , Carmen Armero , Luigi Spezia , Maria Grazia Pennino

We extend the Bayesian Information Criterion (BIC), an asymptotic approximation for the marginal likelihood, to Bayesian networks with hidden variables. This approximation can be used to select models given large samples of data. The…

Machine Learning · Computer Science 2015-05-19 Dan Geiger , David Heckerman , Christopher Meek

We investigate the evidence/flexibility (i.e., "Occam") paradigm and demonstrate the theoretical and empirical consistency of Bayesian evidence for the task of determining an appropriate generative model for network data. This model…

Methodology · Statistics 2024-05-09 Tianyu Wang , Zachary M. Pisano , Carey E. Priebe

We explore the arguments for maximizing the `evidence' as an algorithm for model selection. We show, using a new definition of model complexity which we term `flexibility', that maximizing the evidence should appeal to both Bayesian and…

Statistics Theory · Mathematics 2020-04-16 Jonathan Rougier , Carey Priebe

PAC-Bayesian is an analysis framework where the training error can be expressed as the weighted average of the hypotheses in the posterior distribution whilst incorporating the prior knowledge. In addition to being a pure generalization…

Machine Learning · Computer Science 2022-02-07 Wei Huang , Chunrui Liu , Yilan Chen , Tianyu Liu , Richard Yi Da Xu

Bayesian model selection provides a powerful framework for objectively comparing models directly from observed data, without reference to ground truth data. However, Bayesian model selection requires the computation of the marginal…

Methodology · Statistics 2024-01-17 Xiaohao Cai , Jason D. McEwen , Marcelo Pereyra

A central goal of machine learning is generalization. While the No Free Lunch Theorem states that we cannot obtain theoretical guarantees for generalization without further assumptions, in practice we observe that simple models which…

Machine Learning · Computer Science 2025-06-04 Eric Elmoznino , Tom Marty , Tejas Kasetty , Leo Gagnon , Sarthak Mittal , Mahan Fathi , Dhanya Sridhar , Guillaume Lajoie

Models with intractable likelihood functions arise in areas including network analysis and spatial statistics, especially those involving Gibbs random fields. Posterior parameter es timation in these settings is termed a doubly-intractable…

Computation · Statistics 2018-10-16 Lampros Bouranis , Nial Friel , Florian Maire

Likelihood based-learning of graphical models faces challenges of computational-complexity and robustness to model mis-specification. This paper studies methods that fit parameters directly to maximize a measure of the accuracy of predicted…

Machine Learning · Computer Science 2014-07-04 Justin Domke

Good large sample performance is typically a minimum requirement of any model selection criterion. This article focuses on the consistency property of the Bayes factor, a commonly used model comparison tool, which has experienced a recent…

Statistics Theory · Mathematics 2016-07-04 Siddhartha Chib , Todd A. Kuffner

An earlier introduced characterization of nonuniform learnability that allows the sample size to depend on the hypothesis to which the learner is compared has been redefined using the measure theoretic approach. Where nonuniform…

Machine Learning · Computer Science 2020-11-03 Ankit Bandyopadhyay

Generalized Bayes posterior distributions are formed by putting a fractional power on the likelihood before combining with the prior via Bayes's formula. This fractional power, which is often viewed as a remedy for potential model…

Methodology · Statistics 2023-04-12 Pei-Shien Wu , Ryan Martin

Graphical models trained using maximum likelihood are a common tool for probabilistic inference of marginal distributions. However, this approach suffers difficulties when either the inference process or the model is approximate. In this…

Machine Learning · Computer Science 2012-06-18 Justin Domke

In this paper we derive an explicit formula for calculating the marginal likelihood of a given factorization of a categorical dataset. Since the marginal likelihood is proportional to the posterior probability of the factorization, these…

Machine Learning · Computer Science 2021-05-19 Anthony LaTorre

Parameter estimates for associated genetic variants, report ed in the initial discovery samples, are often grossly inflated compared to the values observed in the follow-up replication samples. This type of bias is a consequence of the…

Applications · Statistics 2011-04-15 Lizhen Xu , Radu V. Craiu , Lei Sun