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Decompressive craniectomy (DC) is a common surgical procedure consisting of the removal of a portion of the skull that is performed after incidents such as stroke, traumatic brain injury (TBI) or other events that could result in acute…

Image and Video Processing · Electrical Eng. & Systems 2020-07-14 Franco Matzkin , Virginia Newcombe , Susan Stevenson , Aneesh Khetani , Tom Newman , Richard Digby , Andrew Stevens , Ben Glocker , Enzo Ferrante

Unlike previous works, this open data collection consists of X-ray cone-beam (CB) computed tomography (CT) datasets specifically designed for machine learning applications and high cone-angle artefact reduction. Forty-two walnuts were…

Image and Video Processing · Electrical Eng. & Systems 2020-09-07 Henri Der Sarkissian , Felix Lucka , Maureen van Eijnatten , Giulia Colacicco , Sophia Bethany Coban , Kees Joost Batenburg

Noninvasive imaging deep into the adult brain at submillimeter and millisecond scales remains a challenge in medical imaging. Here, we report a helmet based ultrasound brain imager built from a customized helmet, a scanned ultrasound array,…

Computational anatomy allows the quantitative analysis of organs in medical images. However, most analysis is constrained to the millimeter scale because of the limited resolution of clinical computed tomography (CT). X-ray microtomography…

Computer Vision and Pattern Recognition · Computer Science 2017-02-28 Holger R. Roth , Kai Nagara , Hirohisa Oda , Masahiro Oda , Tomoshi Sugiyama , Shota Nakamura , Kensaku Mori

Craniofacial reconstruction in forensic science is crucial for the identification of the victims of crimes and disasters. The objective is to map a given skull to its corresponding face in a corpus of faces with known identities using…

Computer Vision and Pattern Recognition · Computer Science 2025-07-14 Ravi Shankar Prasad , Dinesh Singh

The CT perfusion (CTP) is a medical exam for measuring the passage of a bolus of contrast solution through the brain on a pixel-by-pixel basis. The objective is to draw "perfusion maps" (namely cerebral blood volume, cerebral blood flow and…

Image and Video Processing · Electrical Eng. & Systems 2022-08-02 Daniele Perlo , Enzo Tartaglione , Umberto Gava , Federico D'Agata , Edwin Benninck , Mauro Bergui

The human brain cortical layer has a convoluted morphology that is unique to each individual. Characterization of the cortical morphology is necessary in longitudinal studies of structural brain change, as well as in discriminating…

Computer Vision and Pattern Recognition · Computer Science 2018-10-25 Sevil Maghsadhagh , Mousa Shamsi , Anders Eklund , Hamid Behjat

Recent research in computational imaging largely focuses on developing machine learning (ML) techniques for image reconstruction, which requires large-scale training datasets consisting of measurement data and ground-truth images. However,…

Image and Video Processing · Electrical Eng. & Systems 2023-09-26 Maximilian B. Kiss , Sophia B. Coban , K. Joost Batenburg , Tristan van Leeuwen , Felix Lucka

Current methods for magnetic resonance-based positron emission tomography attenuation correction (PET-MR AC) are time consuming, and less able than computed tomography (CT)-based AC methods to capture inter-individual variability and skull…

The human brain cortical layer has a convoluted morphology that is unique to each individual. Characterization of the cortical morphology is necessary in longitudinal studies of structural brain change, as well as in discriminating…

Neurons and Cognition · Quantitative Biology 2019-02-21 Sevil Maghsadhagh , Anders Eklund , Hamid Behjat

We define a graph encoding the structure of contact surgery on contact 3-manifolds and analyze its basic properties and some of its interesting subgraphs.

Geometric Topology · Mathematics 2026-02-10 Marc Kegel , Sinem Onaran

Cross-sectional imaging of human organ serves as a critical tool to provide diagnostic results of many diseases. Based on a unique body coordinate system, we present a method that we use to reconstruct any cross-sectional imaging of organ…

Progress in high-resolution x-ray microtomography has provided us with a practical approach to determining three-dimensional (3D) structures of opaque samples at micrometer to submicrometer resolution. In this review, we give an…

Biological Physics · Physics 2016-09-09 Ryuta Mizutani , Yoshio Suzuki

The electroencephalography (EEG) source imaging problem is very sensitive to the electrical modelling of the skull of the patient under examination. Unfortunately, the currently available EEG devices and their embedded software do not take…

Machine Learning · Computer Science 2020-02-04 Alexandra Koulouri , Ville Rimpilainen

Object segmentation and structure localization are important steps in automated image analysis pipelines for microscopy images. We present a convolution neural network (CNN) based deep learning architecture for segmentation of objects in…

Computer Vision and Pattern Recognition · Computer Science 2019-01-24 Shan E Ahmed Raza , Linda Cheung , Muhammad Shaban , Simon Graham , David Epstein , Stella Pelengaris , Michael Khan , Nasir M. Rajpoot

Transcranial focused ultrasound (tFUS) is a therapeutic ultrasound method that focuses sound through the skull to a small region noninvasively and often under MRI guidance. CT imaging is used to estimate the acoustic properties that vary…

Image and Video Processing · Electrical Eng. & Systems 2022-10-27 Han Liu , Michelle K. Sigona , Thomas J. Manuel , Li Min Chen , Benoit M. Dawant , Charles F. Caskey

This paper presents a database of human faces for persons wearing spectacles. The database consists of images of faces having significant variations with respect to illumination, head pose, skin color, facial expressions and sizes, and…

Computer Vision and Pattern Recognition · Computer Science 2016-08-12 Anirban Dasgupta , Shubhobrata Bhattacharya , Aurobinda Routray

Single cell analysis of human skeletal muscle (SM) tissue cross-sections is a fundamental tool for understanding many neuromuscular disorders. For this analysis to be reliable and reproducible, identification of individual fibres within…

Computer Vision and Pattern Recognition · Computer Science 2023-11-28 Atif Khan , Conor Lawless , Amy Vincent , Charlotte Warren , Valeria Di Leo , Tiago Gomes , A. Stephen McGough

Data clustering has been widely used in data analysis and classification. In the present work, a method based on dynamic quantum clustering is proposed for the segmentation and analysis of brain tumor MRI. The results open the possibility…

Medical Physics · Physics 2021-07-27 Jacksson Sanchez , Miguel Martin Landrove

Skull-stripping is the removal of background and non-brain anatomical features from brain images. While many skull-stripping tools exist, few target pediatric populations. With the emergence of multi-institutional pediatric data acquisition…

Image and Video Processing · Electrical Eng. & Systems 2025-12-05 William Kelley , Nathan Ngo , Adrian V. Dalca , Bruce Fischl , Lilla Zöllei , Malte Hoffmann