Related papers: Some minimal bimolecular mass-action systems with …
It is well known that, for mass-action systems, complex-balanced equilibria are asymptotically stable. For generalized mass-action systems, even if there exists a unique complex-balanced equilibrium (in every stoichiometric class and for…
The symmetric harmonic three-mass system with finite rest lengths, despite its apparent simplicity, displays a wide array of interesting dynamics for different energy values. At low energy the system shows regular behavior that produces a…
We address the question of which small, bimolecular, mass action chemical reaction networks (CRNs) are capable of Andronov-Hopf bifurcation (from here on abbreviated to "Hopf bifurcation"). It is easily shown that any such network must have…
We state two sufficient criteria for periodic oscillations in mass action systems. Neither criterion requires a computation of the Hurwitz determinants. Instead, both criteria exploit the linear algebra concepts of $D$-stability and…
Chemical reaction systems are dynamical systems that arise in chemical engineering and systems biology. In this work, we consider the question of whether the minimal (in a precise sense) multistationary chemical reaction networks, which we…
We obtain optimal moment bounds for Birkhoff sums, and optimal concentration inequalities, for a large class of slowly mixing dynamical systems, including those that admit anomalous diffusion in the form of a stable law or a central limit…
We consider a general class of translation-invariant systems with a specific category of output nonlinearities motivated by biological sensing. We show that no dynamic output feedback can stabilize this class of systems to an isolated…
We consider a system of $ N $ interacting fermions in $ \mathbb{R}^3 $ confined by an external potential and in the presence of a homogeneous magnetic field. The intensity of the interaction has the mean-field scaling $ 1/N $. With a…
We give a lower bound on the ground state energy of a system of two fermions of one species interacting with two fermions of another species via point interactions. We show that there is a critical mass ratio m_c \approx 0.58 such that the…
Numerical simulations of classical pattern forming reaction-diffusion systems indicate that they often operate in the strongly nonlinear regime, with the final steady-state consisting of a spatially repeating pattern of localized spikes. In…
Mass-action chemical reaction systems are frequently used in Computational Biology. The corresponding polynomial dynamical systems are often large (consisting of tens or even hundreds of ordinary differential equations) and poorly…
Nonlocal interactions are ubiquitous in nature and play a central role in many biological systems. In this paper, we perform a bifurcation analysis of a widely-applicable advection-diffusion model with nonlocal advection terms describing…
Living systems are forced away from thermodynamic equilibrium by exchange of mass and energy with their environment. In order to model a biochemical reaction network in a non-equilibrium state one requires a mathematical formulation to…
We study a many-body system of interacting fermionic atoms of two species that are in thermodynamic equilibrium with their condensed heteronuclear bound states (molecules). In order to describe such an equilibrium state, we use a…
We consider the macroscopic regimes and the scenarios for the onset and the suppression of collective oscillations in a heterogeneous population of active rotators, comprised of excitable or oscillatory elements. We analyze the system in…
We show that the late-time dynamics of a minimal three-component mass-conserving reaction--diffusion system reduce to a scalar active field theory, Active Model B$^-$ (AMB$^-$), in which a density-dependent interfacial coefficient…
For dynamical systems arising from chemical reaction networks, persistence is the property that each species concentration remains positively bounded away from zero, as long as species concentrations were all positive in the beginning. We…
Very often, models in biology, chemistry, physics, and engineering are systems of polynomial or power-law ordinary differential equations, arising from a reaction network. Such dynamical systems can be generated by many different reaction…
Motivated by Furstenberg's Theorem on sets in the circle invariant under multiplication by a non-lacunary semigroup, we define a general class of dynamical systems possessing similar topological dynamical properties. We call such systems…
Cellular decision-making (CDM) is a dynamic phenomenon often controlled by regulatory networks defining interactions between genes and transcription factor proteins. Traditional studies have focussed on molecular switches such as positive…