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Morphology of mitochondria plays critical roles in mediating their physiological functions. Accurate segmentation of mitochondria from 3D electron microscopy (EM) images is essential to quantitative characterization of their morphology at…

Computer Vision and Pattern Recognition · Computer Science 2022-06-16 Yunpeng Xiao , Youpeng Zhao , Ge Yang

In the last years, automated segmentation has become a necessary tool for volume electron microscopy (EM) imaging. So far, the best performing techniques have been largely based on fully supervised encoder-decoder CNNs, requiring a…

Computer Vision and Pattern Recognition · Computer Science 2018-12-19 Joris Roels , Julian Hennies , Yvan Saeys , Wilfried Philips , Anna Kreshuk

Domain adaptation is crucial for transferring the knowledge from the source labeled CT dataset to the target unlabeled MR dataset in abdominal multi-organ segmentation. Meanwhile, it is highly desirable to avoid the high annotation cost…

Computer Vision and Pattern Recognition · Computer Science 2022-05-31 Jin Hong , Yu-Dong Zhang , Weitian Chen

AI-enhanced segmentation of neuronal boundaries in electron microscopy (EM) images is crucial for automatic and accurate neuroinformatics studies. To enhance the limited generalization ability of typical deep learning frameworks for medical…

Computer Vision and Pattern Recognition · Computer Science 2023-05-05 Yuxiang An , Dongnan Liu , Weidong Cai

In medical imaging, the heterogeneity of multi-centre data impedes the applicability of deep learning-based methods and results in significant performance degradation when applying models in an unseen data domain, e.g. a new centreor a new…

Computer Vision and Pattern Recognition · Computer Science 2020-08-12 Hongwei Li , Timo Loehr , Anjany Sekuboyina , Jianguo Zhang , Benedikt Wiestler , Bjoern Menze

Automatic semantic segmentation of magnetic resonance imaging (MRI) images using deep neural networks greatly assists in evaluating and planning treatments for various clinical applications. However, training these models is conditioned on…

Computer Vision and Pattern Recognition · Computer Science 2024-01-17 Navapat Nananukul , Hamid Soltanian-zadeh , Mohammad Rostami

Large-scale labeled training datasets have enabled deep neural networks to excel on a wide range of benchmark vision tasks. However, in many applications it is prohibitively expensive or time-consuming to obtain large quantities of labeled…

Computer Vision and Pattern Recognition · Computer Science 2018-03-28 Sicheng Zhao , Bichen Wu , Joseph Gonzalez , Sanjit A. Seshia , Kurt Keutzer

Large-scale labeled training datasets have enabled deep neural networks to excel across a wide range of benchmark vision tasks. However, in many applications, it is prohibitively expensive and time-consuming to obtain large quantities of…

Computer Vision and Pattern Recognition · Computer Science 2020-09-22 Sicheng Zhao , Xiangyu Yue , Shanghang Zhang , Bo Li , Han Zhao , Bichen Wu , Ravi Krishna , Joseph E. Gonzalez , Alberto L. Sangiovanni-Vincentelli , Sanjit A. Seshia , Kurt Keutzer

Although deep neural networks have achieved remarkable results for the task of semantic segmentation, they usually fail to generalize towards new domains, especially when performing synthetic-to-real adaptation. Such domain shift is…

Computer Vision and Pattern Recognition · Computer Science 2021-10-07 Adriano Cardace , Pierluigi Zama Ramirez , Samuele Salti , Luigi Di Stefano

Automated and semi-automated techniques in biomedical electron microscopy (EM) enable the acquisition of large datasets at a high rate. Segmentation methods are therefore essential to analyze and interpret these large volumes of data, which…

Computer Vision and Pattern Recognition · Computer Science 2023-08-08 Anusha Aswath , Ahmad Alsahaf , Ben N. G. Giepmans , George Azzopardi

Semantic segmentation is a critical step in automated image interpretation and analysis where pixels are classified into one or more predefined semantically meaningful classes. Deep learning approaches for semantic segmentation rely on…

Computer Vision and Pattern Recognition · Computer Science 2023-07-10 Tushar Kataria , Beatrice Knudsen , Shireen Elhabian

Segmentation is a crucial analysis task in biomedical imaging. Given the diverse experimental settings in this field, the lack of generalization limits the use of deep learning in practice. Domain adaptation is a promising remedy: it…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Anwai Archit , Constantin Pape

Deep learning-based models in medical imaging often struggle to generalize effectively to new scans due to data heterogeneity arising from differences in hardware, acquisition parameters, population, and artifacts. This limitation presents…

Image and Video Processing · Electrical Eng. & Systems 2023-08-09 Sebastian Nørgaard Llambias , Mads Nielsen , Mostafa Mehdipour Ghazi

Semantic segmentation is an essential step for electron microscopy (EM) image analysis. Although supervised models have achieved significant progress, the need for labor intensive pixel-wise annotation is a major limitation. To complicate…

Computer Vision and Pattern Recognition · Computer Science 2021-01-11 Jiajin Yi , Zhimin Yuan , Jialin Peng

Unsupervised domain adaptation is effective in leveraging the rich information from the source domain to the unsupervised target domain. Though deep learning and adversarial strategy make an important breakthrough in the adaptability of…

Machine Learning · Computer Science 2020-03-02 You-Wei Luo , Chuan-Xian Ren , Pengfei Ge , Ke-Kun Huang , Yu-Feng Yu

Deep learning has produced state-of-the-art results for a variety of tasks. While such approaches for supervised learning have performed well, they assume that training and testing data are drawn from the same distribution, which may not…

Machine Learning · Computer Science 2020-02-10 Garrett Wilson , Diane J. Cook

We address the problem of visual knowledge adaptation by leveraging labeled patterns from source domain and a very limited number of labeled instances in target domain to learn a robust classifier for visual categorization. This paper…

Computer Vision and Pattern Recognition · Computer Science 2016-08-10 Lei Zhang , David Zhang

This work presents a novel deep learning framework for segmenting cerebral vasculature in hyperspectral brain images. We address the critical challenge of severe label scarcity, which impedes conventional supervised training. Our approach…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Tim Mach , Daniel Rueckert , Alex Berger , Laurin Lux , Ivan Ezhov

A deep learning model trained on some labeled data from a certain source domain generally performs poorly on data from different target domains due to domain shifts. Unsupervised domain adaptation methods address this problem by alleviating…

Image and Video Processing · Electrical Eng. & Systems 2019-08-30 Junlin Yang , Nicha C. Dvornek , Fan Zhang , Julius Chapiro , MingDe Lin , James S. Duncan

The primary objective of domain adaptation methods is to transfer knowledge from a source domain to a target domain that has similar but different data distributions. Thus, in order to correctly classify the unlabeled target domain samples,…

Machine Learning · Computer Science 2019-08-12 Rohith AP , Ambedkar Dukkipati , Gaurav Pandey
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