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Stochastic modeling has become a popular approach to quantify uncertainty in flows through heterogeneous porous media. The uncertainty in heterogeneous structure properties is often parameterized by a high-dimensional random variable. This…

Numerical Analysis · Mathematics 2013-10-22 Lijian Jiang , J. David Moulton , Jia Wei

In this paper we study quantitative stochastic homogenization of a nonlinearly elastic composite material with a laminate microstructure. We prove that for deformations close to the set of rotations the homogenized stored energy function…

Analysis of PDEs · Mathematics 2021-06-17 Stefan Neukamm , Mathias Schäffner , Mario Varga

Automated medical image segmentation inherently involves a certain degree of uncertainty. One key factor contributing to this uncertainty is the ambiguity that can arise in determining the boundaries of a target region of interest,…

Image and Video Processing · Electrical Eng. & Systems 2023-08-28 Qingqiao Hu , Hao Wang , Jing Luo , Yunhao Luo , Zhiheng Zhangg , Jan S. Kirschke , Benedikt Wiestler , Bjoern Menze , Jianguo Zhang , Hongwei Bran Li

Connectedness and applied stress strongly affect elasticity in solids. In various amorphous solids, mechanical stability can be lost either by reducing connectedness or by increasing pressure. We present an effective medium theory of…

Soft Condensed Matter · Physics 2014-12-18 Eric DeGiuli , Adrien Laversanne-Finot , Gustavo Düring , Edan Lerner , Matthieu Wyart

Numerical simulations have been extensively used in the past two decades for the study of intracranial aneurysms (IAs), a dangerous disease that occurs in the arteries that reach the brain. They may affect up to 10 % of the world's…

Fluid Dynamics · Physics 2022-10-12 Iago Oliveira , Philip Cardiff , Carlos E. Baccin , José Gasche

We build surrogate models for dynamic 3D subsurface single-phase flow problems with multiple vertical producing wells. The surrogate model provides efficient pressure estimation of the entire formation at any timestep given a stochastic…

Computational Engineering, Finance, and Science · Computer Science 2021-11-17 Rui Xu , Dongxiao Zhang , Nanzhe Wang

A single solid tumor, composed of nearly identical cells, exhibits heterogeneous dynamics. Cells dynamics in the core is glass-like whereas those in the periphery undergo diffusive or super-diffusive behavior. Quantification of…

Biological Physics · Physics 2020-11-24 Sumit Sinha , D. Thirumalai

We construct a homogeneous, nonlinear elastic constitutive law, that models aspects of the mechanical behavior of inhomogeneous fibrin networks. Fibers in such networks buckle when in compression. We model this as a loss of stiffness in…

Biological Physics · Physics 2015-12-18 Phoebus Rosakis , Jacob Notbohm , Guruswami Ravichandran

A classical problem in elasticity theory involves an inhomogeneity embedded in a material of given stress and shear moduli. The inhomogeneity is a region of arbitrary shape whose stress and shear moduli differ from those of the surrounding…

Materials Science · Physics 2009-11-13 Joachim Mathiesen , Itamar Procaccia , Ido Regev

In this study, a stochastic constitutive modeling approach for elastomeric materials is developed to consider uncertainty in material behavior and its prediction. This effort leads to a demonstration of the deterministic approaches error…

Soft Condensed Matter · Physics 2020-10-27 Aref Ghaderi , Vahid Morovati , Roozbeh Dargazany

A coupled system of nonlinear mixed-type equations modeling early stages of angiogenesis is analyzed in a bounded domain. The system consists of stochastic differential equations describing the movement of the positions of the tip and stalk…

Analysis of PDEs · Mathematics 2022-06-24 Markus Fellner , Ansgar Jüngel

A model is proposed to study the process of hypoxia-induced angiogenesis in cancer cells. The model accounts for the role played by the vascular endothelial growth factor (VEGF)-A in regulating the oxygen intake. VEGF-A is dynamically…

Cell Behavior · Quantitative Biology 2010-12-13 Pasquale Laise , Francesca Di Patti , Duccio Fanelli , Marika Masselli , Annarosa Arcangeli

In image segmentation, there is often more than one plausible solution for a given input. In medical imaging, for example, experts will often disagree about the exact location of object boundaries. Estimating this inherent uncertainty and…

Computer Vision and Pattern Recognition · Computer Science 2020-12-23 Miguel Monteiro , Loïc Le Folgoc , Daniel Coelho de Castro , Nick Pawlowski , Bernardo Marques , Konstantinos Kamnitsas , Mark van der Wilk , Ben Glocker

The evolutionary fitness landscape of biological molecules is extremely sparse and heterogeneous, with functional sequences forming isolated dense ``islands'' within a vast combinatorial space of largely non-functional variants. Protein…

The temporal autocorrelation (AC) function associated with monitoring order parameters characterizing conformational fluctuations of an enzyme is analyzed using a collection of surrogate models. The surrogates considered are…

Statistical Mechanics · Physics 2013-05-29 Christopher P. Calderon

In recent years, many difficulties appeared when taking into account the inherent stochastic behavior of neurons and voltage-dependent ion channels in Hodgking-Huxley type models. In particular, an open problem for a stochastic model of…

Dynamical Systems · Mathematics 2012-09-21 Jacky Cresson , Bénédicte Puig , Stefanie Sonner

Non-spherical particles transported by an anisotropic turbulent flow preferentially align with the mean shear and intermittently tumble when the local strain fluctuates. Such an intricate behaviour is here studied for inertialess,…

Soft Condensed Matter · Physics 2022-12-27 Lorenzo Campana , Mireille Bossy , Jeremie Bec

Motivated by an application involving additively manufactured bioresorbable polymer scaffolds supporting bone tissue regeneration, we investigate the impact of uncertain geometry perturbations on the effective mechanical properties of…

Analysis of PDEs · Mathematics 2023-04-19 Patrick Dondl , Yongming Luo , Stefan Neukamm , Steve Wolff-Vorbeck

The emergence of statistical complexity in frictional systems, manifested in broad distributions of various observables, is not yet understood. We study this problem in velocity-driven, homogeneous (no quenched disorder) unstable frictional…

Materials Science · Physics 2024-09-02 Thibault Roch , Efim A. Brener , Jean-François Molinari , Eran Bouchbinder

Stochastic neurons and hard non-linearities can be useful for a number of reasons in deep learning models, but in many cases they pose a challenging problem: how to estimate the gradient of a loss function with respect to the input of such…

Machine Learning · Computer Science 2013-08-16 Yoshua Bengio , Nicholas Léonard , Aaron Courville
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