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Transport of rodlike particles in confinement environments of macromolecular networks plays crucial roles in many important biological processes and technological applications. The relevant understanding has been limited to thin rods with…

We analyze the dynamics of an active tracer particle embedded in a thermal lattice gas. All particles are subject to exclusion up to third nearest neighbors on the square lattice, which leads to slow dynamics at high densities. For the case…

Soft Condensed Matter · Physics 2019-04-15 Rakesh Chatterjee , Nimrod Segall , Carl Merrigan , Kabir Ramola , Bulbul Chakraborty , Yair Shokef

Using Langevin dynamics simulations, we study a system of transversely propelling filament and passive Brownian particles. We consider a polymer whose monomers experience a constant propulsion force perpendicular to the local tangent in the…

Soft Condensed Matter · Physics 2022-12-29 K. R. Prathyusha

In this study, we investigated the motion of active SiO2-Pt Janus particles in the 2D bath of smaller silica tracers dispersed in varying areal densities. The effect on the organization of the tracer particles around the active JPs was also…

Soft Condensed Matter · Physics 2022-02-23 Karnika Singh , Ankit Yadav , Prateek Dwivedi , Rahul Mangal

We propose a theoretical model which relies on the generalized Langevin equation and may account for various dynamical features of the thermal motion of organelles, vesicles or macromolecules in viscoelastic media such as polymer networks.…

Soft Condensed Matter · Physics 2020-01-03 Denis S. Grebenkov , Mahsa Vahabi , Elena Bertseva , Laszlo Forro , Sylvia Jeney

Cellular membranes are elastic lipid bilayers that contain a variety of proteins, including ion channels, receptors, and scaffolding proteins. These proteins are known to diffuse in the plane of the membrane and to influence the bending of…

Soft Condensed Matter · Physics 2020-10-28 Arijit Mahapatra , David Saintillan , Padmini Rangamani

Overdamped Brownian motion of a self-propelled particle is studied by solving the Langevin equation analytically. On top of translational and rotational diffusion, in the context of the presented model, the "active" particle is driven along…

Soft Condensed Matter · Physics 2013-05-15 Borge ten Hagen , Sven van Teeffelen , Hartmut Löwen

We analyze the dynamics of a tracer particle embedded in a bath of hard spheres confined in a channel of varying section. By means of Brownian dynamics simulations we apply a constant force on the tracer particle and discuss the dependence…

Soft Condensed Matter · Physics 2018-11-14 Antonio M. Puertas , Paolo Malgaretti , Ignacio Pagonabarraga

The dynamical properties and diffusive behavior of a collection of mutually interacting particles are numerically investigated for two types of long-range interparticle interactions: Coulomb-electrostatic and dipole-electrodynamic. It is…

We investigate the locomotion of thin, living T. tubifex worms, which display active polymerlike behavior, within quasi-2D arrays of cylindrical pillars, examining varying spatial arrangements and densities. These active worms spread in…

Background: This study is mainly motivated by the need of understanding how the diffusion behaviour of a biomolecule (or even of a larger object) is affected by other moving macromolecules, organelles, and so on, inside a living cell,…

Biological Physics · Physics 2016-01-15 Matteo Gori , Irene Donato , Elena Floriani , Ilaria Nardecchia , Marco Pettini

We study a polar tracer, having a concave surface, immersed in a two-dimensional suspension of active particles. Using Brownian dynamics simulations, we measure the distributions and auto-correlation functions of forces and torque exerted…

Soft Condensed Matter · Physics 2020-12-30 Milos Knezevic , Holger Stark

Most spreading processes require spatial proximity between agents. The stationary state of spreading dynamics in a population of mobile agents thus depends on the interplay between the time and length scales involved in the epidemic process…

Statistical Mechanics · Physics 2024-03-05 Jorge P. Rodríguez , Matteo Paoluzzi , Demian Levis , Michele Starnini

Active and diffusive motion in Brownian particles are regularly observed in fluidic environments, albeit at different time scales. Here, we experimentally study the dynamics of highly asymmetric microclusters trapped in air employing…

We investigate the chemical dissolution of porous media using a network model in which the system is represented as a series of interconnected pipes with the diameter of each segment increasing in proportion to the local reactant…

Fluid Dynamics · Physics 2015-06-12 Agnieszka Budek , Piotr Szymczak

We computationally investigate the active transport of tangentially-driven polymers with varying degrees of flexibility and activity in two-dimensional square lattices of obstacles. Tight periodic confinement induces notable conformational…

Soft Condensed Matter · Physics 2023-10-04 Mohammad Fazelzadeh , Ehsan Irani , Zahra Mokhtari , Sara Jabbari-Farouji

Active microrheology is a valuable tool to determine viscoelastic properties of polymer networks. Observing the beads response to the excitation of a reference leads to dynamic and morphological information of the material. In this work we…

Biological Physics · Physics 2014-07-04 Tobias Paust , Katinka Mertens , Ines Martin , Michael Beil , Othmar Marti

The diffusion motions of individual polymer aggregates in disordered porous media were visualized using the single particle tracking (SPT) method because the motions inside porous media play important roles in various fields of science and…

Soft Condensed Matter · Physics 2024-10-24 Yusaku Abe , Naoki Tomioka , Yu Matsuda

We study pattern formation, fluctuations and scaling induced by a growth-promoting active walker on an otherwise static interface. Active particles on an interface define a simple model for energy consuming proteins embedded in the plasma…

Statistical Mechanics · Physics 2019-11-28 Prachi Bisht , Mustansir Barma

Self-propelling active particles are an exciting and interdisciplinary emerging area of research with projected biomedical and environmental applications. Due to their autonomous motion, control over these active particles that are free to…

Fluid Dynamics · Physics 2023-02-10 Sankha Shuvra Das , Gilad Yossifon