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We study classes of dynamical systems that can be obtained by constructing recursive networks with monotone Boolean functions. Stack filters in nonlinear signal processing are special cases of such systems. We show an analytical connection…

Disordered Systems and Neural Networks · Physics 2009-07-28 Matti Nykter , Juha Kesseli , Ilya Shmulevich

Recently, arXiv:2312.16035 showed that all logics based on Boolean Normal monotonic three-valued schemes coincide with classical logic when defined using a strict-tolerant standard ($\mathbf{st}$). Conversely, they proved that under a…

Logic · Mathematics 2025-03-31 Quentin Blomet , Bruno Da Ré

Networks (or graphs) are used to model the dyadic relations between entities in a complex system. In cases where there exists multiple relations between the entities, the complex system can be represented as a multilayer network, where the…

Social and Information Networks · Computer Science 2019-10-04 Abhishek Santra , Sanjukta Bhowmick , Sharma Chakravarthy

When using Bayesian networks for modelling the behavior of man-made machinery, it usually happens that a large part of the model is deterministic. For such Bayesian networks deterministic part of the model can be represented as a Boolean…

Artificial Intelligence · Computer Science 2013-01-18 Thomas D. Nielsen , Pierre-Henri Wuillemin , Finn Verner Jensen , Uffe Kjærulff

The generating functional method is employed to investigate the synchronous dynamics of Boolean networks, providing an exact result for the system dynamics via a set of macroscopic order parameters. The topology of the networks studied and…

Disordered Systems and Neural Networks · Physics 2015-05-28 Alexander Mozeika , David Saad

Boolean networks are widely used to model biological regulatory networks and study their dynamics. Classical semantics, such as the asynchronous semantics, do not always accurately capture transient or asymptotic behaviors observed in…

Discrete Mathematics · Computer Science 2026-04-06 Laure de Chancel , Brigitte Mossé , Aurélien Naldi , Élisabeth Remy

In the applications of Boolean networks to modeling biological systems, an important computational problem is the detection of the fixed points of these networks. This is an NP-complete problem in general. There have been various attempts…

Quantitative Methods · Quantitative Biology 2014-04-23 Yi Ming Zou

It is an increasingly important problem to study conditions on the structure of a network that guarantee a given behavior for its underlying dynamical system. In this paper we report that a Boolean network may fall within the chaotic…

Molecular Networks · Quantitative Biology 2008-11-04 Winfried Just , German Enciso

Boolean networks are popular tools for the exploration of qualitative dynamical properties of biological systems. Several dynamical interpretations have been proposed based on the same logical structure that captures the interactions…

Discrete Mathematics · Computer Science 2022-03-04 Aurélien Naldi , Adrien Richard , Elisa Tonello

In this paper we discuss an efficient technique that can implement any given Boolean function as a quantum circuit. The method converts a truth table of a Boolean function to the corresponding quantum circuit using a minimal number of…

Quantum Physics · Physics 2008-08-06 Ahmed Younes , Julian Miller

Here we propose four-terminal molecular devices as functional logic gates (AND, NOR and XOR, respectively). Such devices are composed of single organic molecule connected to gold electrodes and located in between gate terminals.…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 Kamil Walczak

This paper presents the foundation for a decomposition theory for Boolean networks, a type of discrete dynamical system that has found a wide range of applications in the life sciences, engineering, and physics. Given a Boolean network…

Dynamical Systems · Mathematics 2022-06-10 Claus Kadelka , Reinhard Laubenbacher , David Murrugarra , Alan Veliz-Cuba , Matthew Wheeler

Boolean networks are an important class of computational models for molecular interaction networks. Boolean canalization, a type of hierarchical clustering of the inputs of a Boolean function, has been extensively studied in the context of…

Molecular Networks · Quantitative Biology 2024-07-09 David Murrugarra , Elena S. Dimitrova

We propose a new static program analysis called program behavior analysis. The analysis aims to calculate possible symbolic expressions for every variable at each program point. We design a new lattice, transfer function, and widening…

Software Engineering · Computer Science 2024-05-03 Qi Zhan

This paper studies the mathematical properties of collectively canalizing Boolean functions, a class of functions that has arisen from applications in systems biology. Boolean networks are an increasingly popular modeling framework for…

Discrete Mathematics · Computer Science 2023-06-07 Claus Kadelka , Benjamin Keilty , Reinhard Laubenbacher

Synthesis consists in deciding whether a given labeled transition system (TS) $A$ can be implemented by a net $N$ of type $\tau$. In case of a negative decision, it may be possible to convert $A$ into an implementable TS $B$ by applying…

Computational Complexity · Computer Science 2026-04-08 Raymond Devillers , Ronny Tredup

Discrete modelling frameworks of Biological networks can be divided in two distinct categories: Boolean and Multi-valued. Although Multi-valued networks are more expressive for qualifying the regulatory behaviours modelled by more than two…

Discrete Mathematics · Computer Science 2020-01-22 Franck Delaplace , Sergiu Ivanov

A probabilistic Boolean network (PBN) is a discrete-time system composed of a collection of Boolean networks between which the PBN switches in a stochastic manner. This paper focuses on the study of quotients of PBNs. Given a PBN and an…

Optimization and Control · Mathematics 2021-08-02 Rui Li , Qi Zhang , Tianguang Chu

Logic locking has become a promising approach to provide hardware security in the face of a possibly insecure fabrication supply chain. While many techniques have focused on locking combinational logic (CL), an alternative latch-locking…

Cryptography and Security · Computer Science 2023-05-02 Dake Chen , Xuan Zhou , Yinghua Hu , Yuke Zhang , Kaixin Yang , Andrew Rittenbach , Pierluigi Nuzzo , Peter A. Beerel

Many underlying structural and functional factors that determine the fault behavior of a combinational network, are not yet fully understood. In this paper, we show that there exists a large class of Boolean functions, called root…

Other Computer Science · Computer Science 2013-09-17 Debesh K. Das , Debabani Chowdhury , Bhargab B. Bhattacharya , Tsutomu Sasao