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Related papers: Graph Masked Autoencoders with Transformers

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Masked Autoencoders (MAE) have shown great potentials in self-supervised pre-training for language and 2D image transformers. However, it still remains an open question on how to exploit masked autoencoding for learning 3D representations…

Computer Vision and Pattern Recognition · Computer Science 2022-10-17 Renrui Zhang , Ziyu Guo , Rongyao Fang , Bin Zhao , Dong Wang , Yu Qiao , Hongsheng Li , Peng Gao

Although graph-based learning has attracted a lot of attention, graph representation learning is still a challenging task whose resolution may impact key application fields such as chemistry or biology. To this end, we introduce GRALE, a…

Machine Learning · Computer Science 2025-10-21 Paul Krzakala , Gabriel Melo , Charlotte Laclau , Florence d'Alché-Buc , Rémi Flamary

We investigated the adaptation and performance of Masked Autoencoders (MAEs) with Vision Transformer (ViT) architectures for self-supervised representation learning on one-dimensional (1D) ultrasound signals. Although MAEs have demonstrated…

Machine Learning · Computer Science 2025-08-29 Immanuel Roßteutscher , Klaus S. Drese , Thorsten Uphues

Building scalable models to learn from diverse, multimodal data remains an open challenge. For vision-language data, the dominant approaches are based on contrastive learning objectives that train a separate encoder for each modality. While…

Computer Vision and Pattern Recognition · Computer Science 2022-10-24 Xinyang Geng , Hao Liu , Lisa Lee , Dale Schuurmans , Sergey Levine , Pieter Abbeel

How to obtain informative representations of molecules is a crucial prerequisite in AI-driven drug design and discovery. Recent researches abstract molecules as graphs and employ Graph Neural Networks (GNNs) for molecular representation…

Biomolecules · Quantitative Biology 2020-10-30 Yu Rong , Yatao Bian , Tingyang Xu , Weiyang Xie , Ying Wei , Wenbing Huang , Junzhou Huang

Despite decades of research, understanding human manipulation activities is, and has always been, one of the most attractive and challenging research topics in computer vision and robotics. Recognition and prediction of observed human…

Computer Vision and Pattern Recognition · Computer Science 2021-10-27 Gamze Akyol , Sanem Sariel , Eren Erdal Aksoy

Network traffic classification using self-supervised pre-training models based on Masked Autoencoders (MAE) has demonstrated a huge potential. However, existing methods are confined to isolated byte-level reconstruction of individual flows,…

Cryptography and Security · Computer Science 2026-04-01 Xiao Liu , Xiaowei Fu , Fuxiang Huang , Lei Zhang

We present a novel masked image modeling (MIM) approach, context autoencoder (CAE), for self-supervised representation pretraining. We pretrain an encoder by making predictions in the encoded representation space. The pretraining tasks…

Computer Vision and Pattern Recognition · Computer Science 2023-08-11 Xiaokang Chen , Mingyu Ding , Xiaodi Wang , Ying Xin , Shentong Mo , Yunhao Wang , Shumin Han , Ping Luo , Gang Zeng , Jingdong Wang

New algorithms for embedding graphs have reduced the asymptotic complexity of finding low-dimensional representations. One-Hot Graph Encoder Embedding (GEE) uses a single, linear pass over edges and produces an embedding that converges…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-08 Ariel Lubonja , Cencheng Shen , Carey Priebe , Randal Burns

Link prediction is one of the key problems for graph-structured data. With the advancement of graph neural networks, graph autoencoders (GAEs) and variational graph autoencoders (VGAEs) have been proposed to learn graph embeddings in an…

Machine Learning · Computer Science 2021-09-14 Seong Jin Ahn , Myoung Ho Kim

Generative models for graph data are an important research topic in machine learning. Graph data comprise two levels that are typically analyzed separately: node-level properties such as the existence of a link between a pair of nodes, and…

Machine Learning · Computer Science 2023-01-18 Kiarash Zahirnia , Oliver Schulte , Parmis Naddaf , Ke Li

We present the Topology Transformation Equivariant Representation learning, a general paradigm of self-supervised learning for node representations of graph data to enable the wide applicability of Graph Convolutional Neural Networks…

Machine Learning · Computer Science 2021-12-03 Xiang Gao , Wei Hu , Guo-Jun Qi

Face swapping has gained significant attention for its varied applications. Most previous face swapping approaches have relied on the seesaw game training scheme, also known as the target-oriented approach. However, this often leads to…

Computer Vision and Pattern Recognition · Computer Science 2024-07-23 Jaeseong Lee , Junha Hyung , Sohyun Jeong , Jaegul Choo

Unsupervised graph representation learning aims to distill various graph information into a downstream task-agnostic dense vector embedding. However, existing graph representation learning approaches are designed mainly under the node…

Machine Learning · Computer Science 2022-03-04 You Li , Bei Lin , Binli Luo , Ning Gui

Autoencoders based on Graph Neural Networks (GNNs) have garnered significant attention in recent years for their ability to extract informative latent representations, characterizing the structure of complex topologies, such as graphs.…

Masked AutoEncoder (MAE) has revolutionized the field of self-supervised learning with its simple yet effective masking and reconstruction strategies. However, despite achieving state-of-the-art performance across various downstream vision…

Computer Vision and Pattern Recognition · Computer Science 2023-12-11 Xiaoyu Yue , Lei Bai , Meng Wei , Jiangmiao Pang , Xihui Liu , Luping Zhou , Wanli Ouyang

Learning graph embeddings is a crucial task in graph mining tasks. An effective graph embedding model can learn low-dimensional representations from graph-structured data for data publishing benefiting various downstream applications such…

Machine Learning · Computer Science 2023-08-17 Qi Hu , Yangqiu Song

Inspired by recent advances in diffusion models, which are reminiscent of denoising autoencoders, we investigate whether they can acquire discriminative representations for classification via generative pre-training. This paper shows that…

Computer Vision and Pattern Recognition · Computer Science 2023-08-22 Weilai Xiang , Hongyu Yang , Di Huang , Yunhong Wang

Diffusion models have established themselves as state-of-the-art generative models across various data modalities, including images and videos, due to their ability to accurately approximate complex data distributions. Unlike traditional…

Machine Learning · Computer Science 2025-10-23 Daniel Wesego

Missing input sequences are common in medical imaging data, posing a challenge for deep learning models reliant on complete input data. In this work, inspired by MultiMAE [2], we develop a masked autoencoder (MAE) paradigm for multi-modal,…

Computer Vision and Pattern Recognition · Computer Science 2026-02-04 Ayhan Can Erdur , Christian Beischl , Daniel Scholz , Jiazhen Pan , Benedikt Wiestler , Daniel Rueckert , Jan C Peeken