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We propose a new approach for clustering DNA features using array CGH data from multiple tumor samples. We distinguish data-collapsing: joining contiguous DNA clones or probes with extremely similar data into regions, from clustering:…

Applications · Statistics 2010-12-21 Kyung In Kim , Etienne Roquain , Mark Van De Wiel

A clustering algorithm partitions a set of data points into smaller sets (clusters) such that each subset is more tightly packed than the whole. Many approaches to clustering translate the vector data into a graph with edges reflecting a…

Geometric Topology · Mathematics 2012-06-06 Jesse Johnson

Finding clusters of well-connected nodes in a graph is an extensively studied problem in graph-based data analysis. Because of its many applications, a large number of distinct graph clustering objective functions and algorithms have…

Social and Information Networks · Computer Science 2019-03-14 Nate Veldt , David F. Gleich , Anthony Wirth

Data clustering is an approach to seek for structure in sets of complex data, i.e., sets of "objects". The main objective is to identify groups of objects which are similar to each other, e.g., for classification. Here, an introduction to…

Data Analysis, Statistics and Probability · Physics 2016-02-17 Alexander K. Hartmann

Clustering is an important topic in algorithms, and has a number of applications in machine learning, computer vision, statistics, and several other research disciplines. Traditional objectives of graph clustering are to find clusters with…

Machine Learning · Computer Science 2020-11-11 Steinar Laenen , He Sun

Density based spatial clustering of points in $\mathbb{R}^n$ has a myriad of applications in a variety of industries. We generalise this problem to the density based clustering of lines in high-dimensional spaces, keeping in mind there…

Machine Learning · Computer Science 2024-10-04 Akanksha Das , Malay Bhattacharyya

Graph clustering involves the task of dividing nodes into clusters, so that the edge density is higher within clusters as opposed to across clusters. A natural, classic and popular statistical setting for evaluating solutions to this…

Machine Learning · Statistics 2016-11-17 Yudong Chen , Sujay Sanghavi , Huan Xu

This paper considers the problem of clustering a partially observed unweighted graph---i.e., one where for some node pairs we know there is an edge between them, for some others we know there is no edge, and for the remaining we do not know…

Machine Learning · Computer Science 2014-07-25 Yudong Chen , Ali Jalali , Sujay Sanghavi , Huan Xu

Clustering is a common technique for statistical data analysis, which is used in many fields, including machine learning, data mining, pattern recognition, image analysis and bioinformatics. Clustering is the process of grouping similar…

Data Structures and Algorithms · Computer Science 2012-05-08 T. Soni Madhulatha

We propose a Fourier-based approach for optimization of several clustering algorithms. Mathematically, clusters data can be described by a density function represented by the Dirac mixture distribution. The density function can be smoothed…

Machine Learning · Computer Science 2019-09-24 Soheil Mehrabkhani

Clustering is a core task in machine learning with wide-ranging applications in data mining and pattern recognition. However, its unsupervised nature makes it inherently challenging. Many existing clustering algorithms suffer from critical…

Machine Learning · Computer Science 2025-07-29 Ahmed Shokry , Ayman Khalafallah

Clustering is a widely used technique with a long and rich history in a variety of areas. However, most existing algorithms do not scale well to large datasets, or are missing theoretical guarantees of convergence. This paper introduces a…

Machine Learning · Statistics 2024-10-16 Yijia Zhou , Kyle A. Gallivan , Adrian Barbu

Clustering is an essential data mining tool for analyzing and grouping similar objects. In big data applications, however, many clustering algorithms are infeasible due to their high memory requirements and/or unfavorable runtime…

Data Structures and Algorithms · Computer Science 2026-01-27 Gregor Ulm , Simon Smith , Adrian Nilsson , Emil Gustavsson , Mats Jirstrand

Classification of cluster variables in cluster algebras (in particular, Grassmannian cluster algebras) is an important problem, which has direct application to computations of scattering amplitudes in physics. In this paper, we apply the…

High Energy Physics - Theory · Physics 2026-02-16 Man-Wai Cheung , Pierre-Philippe Dechant , Yang-Hui He , Elli Heyes , Edward Hirst , Jian-Rong Li

Graph clustering has many important applications in computing, but due to the increasing sizes of graphs, even traditionally fast clustering methods can be computationally expensive for real-world graphs of interest. Scalability problems…

Social and Information Networks · Computer Science 2018-10-18 Kimon Fountoulakis , David F. Gleich , Michael W. Mahoney

In standard clustering problems, data points are represented by vectors, and by stacking them together, one forms a data matrix with row or column cluster structure. In this paper, we consider a class of binary matrices, arising in many…

Machine Learning · Statistics 2014-02-06 Jiaming Xu , Rui Wu , Kai Zhu , Bruce Hajek , R. Srikant , Lei Ying

Motivated by applications in social and biological network analysis, we introduce a new form of agnostic clustering termed~\emph{motif correlation clustering}, which aims to minimize the cost of clustering errors associated with both edges…

Data Structures and Algorithms · Computer Science 2018-11-07 Pan Li , Gregory J. Puleo , Olgica Milenkovic

Clustering is an unsupervised technique of Data Mining. It means grouping similar objects together and separating the dissimilar ones. Each object in the data set is assigned a class label in the clustering process using a distance measure.…

Information Retrieval · Computer Science 2011-10-13 Parul Agarwal , M. Afshar Alam , Ranjit Biswas

The analysis of continously larger datasets is a task of major importance in a wide variety of scientific fields. In this sense, cluster analysis algorithms are a key element of exploratory data analysis, due to their easiness in the…

Machine Learning · Statistics 2018-01-10 Marco Capó , Aritz Pérez , Jose A. Lozano

A model based clustering procedure for data of mixed type, clustMD, is developed using a latent variable model. It is proposed that a latent variable, following a mixture of Gaussian distributions, generates the observed data of mixed type.…

Methodology · Statistics 2015-11-06 Damien McParland , Isobel Claire Gormley
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