Related papers: A Maxwell-Amp\`{e}re Nernst-Planck Framework for M…
In this paper, we construct a semi-implicit finite difference method for the time dependent Poisson-Nernst-Planck system. Although the Poisson-Nernst-Planck system is a nonlinear system, the numerical method presented in this paper only…
We develop a modified Poisson-Nernst-Planck model which includes both the long-range Coulomb and short-range hard-sphere correlations in its free energy functional such that the model can accurately describe the ion transport in complex…
We consider the Brans-Dicke Reissner-Nordstrom spacetime in isotropic coordinates and the electrostatic field of an electric point charge placed outside its surface of inversion. We treat the static electric point charge as a linear…
Cellular electrophysiology is often modeled using the cable equations. The cable model can only be used when ionic concentration effects and three dimensional geometry effects are negligible. The Poisson model, in which the electrostatic…
This paper analyzes various schemes for the Euler-Poisson-Boltzmann (EPB) model of plasma physics. This model consists of the pressureless gas dynamics equations coupled with the Poisson equation and where the Boltzmann relation relates the…
Modeling the intermittent behavior of turbulent energy dissipation processes both in space and time is often a relevant problem when dealing with phenomena occurring in high Reynolds number flows, especially in astrophysical and space…
The nonlocal Allen-Cahn equation with nonlocal diffusion operator is a generalization of the classical Allen-Cahn equation. It satisfies the energy dissipation law and maximum bound principle (MBP), and is important for simulating a series…
In this paper, we develop an asymptotic-preserving and energy-conserving (APEC) Particle-In-Cell (PIC) algorithm for the Vlasov-Maxwell system. This algorithm not only guarantees that the asymptotic limiting of the discrete scheme is a…
A variational model of pressure-dependent plasticity employing a time-incremental setting is introduced. A novel formulation of the dissipation potential allows one to construct the condensed energy in a variationally consistent manner. For…
This work presents a finite element method for a modified Poisson-Nernst-Planck/Navier-Stokes (PNP/NS) model under the mechanical equilibrium, developed for compressible electrolytes. Another key contribution of this work is the reduction…
This talk is assumed to exhibit an overview of the quantum theory for mesoscopic electric circuits and some of its further developments. In the theory the importance of the discreteness of electronic charge in mesoscopic electric circuit is…
Stress, or pressure, is a central quantity in engineering and remains vital in molecular modelling. However, the commonly used virial stress tensor is invalid for an inhomogeneous fluid, which is essential in fluid dynamics and…
Most organic and inorganic surfaces (e.g., glass, nucleic acids or lipid membranes) become charged in aqueous solutions. The resulting ionic distribution induces effective interactions between the charged surfaces. Stacks of like-charged…
Onsager's variational principle is generalized to address the diffusive dynamics of an electrolyte solution composed of charge-regulated macro-ions and counterions. The free energy entering the Rayleighian corresponds to the…
A simple model of charge transport is provided by a classical particle in a smooth random potential and a dissipative coupling to the environment in the form of Markovian noise and friction. The corresponding Non-Equilibrium Steady State…
Electrostatics is of paramount importance to chemistry, physics, biology, and medicine. The Poisson-Boltzmann (PB) theory is a primary model for electrostatic analysis. However, it is highly challenging to compute accurate PB electrostatic…
We analyze mesons in constant magnetic fields ($B$) within a non-relativistic constituent quark model. Our quark model contains a harmonic oscillator type confining potential, and we perturbatively treat short range correlations to account…
Motivated by the century-old problem of modeling the electron as a pointlike particle with finite self energy, we develop a new class of nonlinear perturbations of Maxwell's electrodynamics inspired by, but distinct from, the Born--Infeld…
In simulating charged systems, it is often useful to treat some ionic components of the system at the mean-field level and solve the Poisson-Boltzmann (PB) equation to get their respective density profiles. The numerically intensive task of…
We report a multiscale modeling study for charged cylindrical nanopores using three modeling levels that include (1) an all-atom explicit-water model studied with molecular dynamics (MD), and reduced models with implicit water containing…