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Functional magnetic resonance imaging (fMRI) reveals complex brain functional networks with hierarchical topologies crucial for cognitive processing. Standard Euclidean Graph Neural Networks (GNNs) often struggle to represent these…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Junhao Jia , Yunyou Liu , Cheng Yang , Yifei Sun , Feiwei Qin , Changmiao Wang , Yong Peng

Hyperbolic representations are effective in modeling knowledge graph data which is prevalently used to facilitate multi-hop reasoning. However, a rigorous and detailed comparison of the two spaces for this task is lacking. In this paper,…

Computation and Language · Computer Science 2025-07-08 Simon Welz , Lucie Flek , Akbar Karimi

In machine learning, data is usually represented in a (flat) Euclidean space where distances between points are along straight lines. Researchers have recently considered more exotic (non-Euclidean) Riemannian manifolds such as hyperbolic…

Machine Learning · Computer Science 2021-01-12 Marc T. Law , Jos Stam

This survey reviews hyperbolic graph embedding models, and evaluate them on anomaly detection, highlighting their advantages over Euclidean methods in capturing complex structures. Evaluating models like \textit{HGCAE},…

Most previous heterogeneous graph embedding models represent elements in a heterogeneous graph as vector representations in a low-dimensional Euclidean space. However, because heterogeneous graphs inherently possess complex structures, such…

Machine Learning · Computer Science 2024-04-16 Jongmin Park , Seunghoon Han , Soohwan Jeong , Sungsu Lim

Finding the optimal embedding of networks into low-dimensional hyperbolic spaces is a challenge that received considerable interest in recent years, with several different approaches proposed in the literature. In general, these methods…

Physics and Society · Physics 2024-01-08 Bendegúz Sulyok , Gergely Palla

The recent reconstruction of the Drosophila brain provides a neural network of unprecedented size and level of details. In this work, we study the geometrical properties of this system by applying network embedding techniques to the graph…

Physics and Society · Physics 2026-02-19 Bendegúz Sulyok , Sámuel G. Balogh , Gergely Palla

Hyperbolic space and hyperbolic embeddings are becoming a popular research field for recommender systems. However, it is not clear under what circumstances the hyperbolic space should be considered. To fill this gap, This paper provides…

Information Retrieval · Computer Science 2022-01-26 Sixiao Zhang , Hongxu Chen , Xiao Ming , Lizhen Cui , Hongzhi Yin , Guandong Xu

Embedded topic models are able to learn interpretable topics even with large and heavy-tailed vocabularies. However, they generally hold the Euclidean embedding space assumption, leading to a basic limitation in capturing hierarchical…

Information Retrieval · Computer Science 2022-10-20 Yishi Xu , Dongsheng Wang , Bo Chen , Ruiying Lu , Zhibin Duan , Mingyuan Zhou

Network embedding is a fervid topic in current networks science and observes that most real complex systems can be embedded in hidden metrics space and emerge as the geometrical property, where the geometric distance between nodes…

Physics and Society · Physics 2020-04-28 Zongning Wu , Zengru Di , Ying Fan

Label inventories for fine-grained entity typing have grown in size and complexity. Nonetheless, they exhibit a hierarchical structure. Hyperbolic spaces offer a mathematically appealing approach for learning hierarchical representations of…

Computation and Language · Computer Science 2020-10-06 Federico López , Michael Strube

HyperGraph Convolutional Neural Networks (HGCNNs) have demonstrated their potential in modeling high-order relations preserved in graph structured data. However, most existing convolution filters are localized and determined by the…

Machine Learning · Computer Science 2021-06-11 Jiying Zhang , Yuzhao Chen , Xi Xiao , Runiu Lu , Shu-Tao Xia

Hyperbolic manifolds for visual representation learning allow for effective learning of semantic class hierarchies by naturally embedding tree-like structures with low distortion within a low-dimensional representation space. The highly…

Computer Vision and Pattern Recognition · Computer Science 2023-05-19 Aiden Durrant , Georgios Leontidis

Protein-ligand binding prediction is central to virtual screening and affinity ranking, two fundamental tasks in drug discovery. While recent retrieval-based methods embed ligands and protein pockets into Euclidean space for…

Machine Learning · Computer Science 2025-11-25 Jianhui Wang , Wenyu Zhu , Bowen Gao , Xin Hong , Ya-Qin Zhang , Wei-Ying Ma , Yanyan Lan

Hyperbolic geometry is gaining traction in machine learning for its effectiveness at capturing hierarchical structures in real-world data. Hyperbolic spaces, where neighborhoods grow exponentially, offer substantial advantages and…

Machine Learning · Computer Science 2024-03-06 Philippe Chlenski , Ethan Turok , Antonio Moretti , Itsik Pe'er

We introduce a simple autoencoder based on hyperbolic geometry for solving standard collaborative filtering problem. In contrast to many modern deep learning techniques, we build our solution using only a single hidden layer. Remarkably,…

Information Retrieval · Computer Science 2020-08-18 Leyla Mirvakhabova , Evgeny Frolov , Valentin Khrulkov , Ivan Oseledets , Alexander Tuzhilin

The choice of geometric space for knowledge graph (KG) embeddings can have significant effects on the performance of KG completion tasks. The hyperbolic geometry has been shown to capture the hierarchical patterns due to its tree-like…

Machine Learning · Computer Science 2022-11-08 Huiru Xiao , Xin Liu , Yangqiu Song , Ginny Y. Wong , Simon See

The hyperbolic manifold is a smooth manifold of negative constant curvature. While the hyperbolic manifold is well-studied in the literature, it has gained interest in the machine learning and natural language processing communities lately…

Machine Learning · Computer Science 2019-03-19 Pratik Jawanpuria , Mayank Meghwanshi , Bamdev Mishra

Hyperbolic space is a natural setting for mining and visualizing data with hierarchical structure. In order to compute a hyperbolic embedding from comparison or similarity information, one has to solve a hyperbolic distance geometry…

Machine Learning · Computer Science 2020-09-14 Puoya Tabaghi , Ivan Dokmanić

Recent knowledge graph embedding (KGE) models based on hyperbolic geometry have shown great potential in a low-dimensional embedding space. However, the necessity of hyperbolic space in KGE is still questionable, because the calculation…

Artificial Intelligence · Computer Science 2021-10-26 Kai Wang , Yu Liu , Dan Lin , Quan Z. Sheng
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