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Suppressing SARS-CoV-2 will likely require the rapid identification and isolation of infected individuals, on an ongoing basis. RT-PCR (reverse transcription polymerase chain reaction) tests are accurate but costly, making regular testing…

Group testing is an efficient method for testing a large population to detect infected individuals. In this paper, we consider an efficient adaptive two stage group testing scheme. Using a straightforward analysis, we characterize the…

Methodology · Statistics 2020-08-26 Arjun Kodialam

Group testing can help maintain a widespread testing program using fewer resources amid a pandemic. In group testing, we are given $n$ samples, one per individual. These samples are arranged into $m < n$ pooled samples, where each pool is…

Information Theory · Computer Science 2022-01-20 Ritesh Goenka , Shu-Jie Cao , Chau-Wai Wong , Ajit Rajwade , Dror Baron

The use of group testing to locate all instances of disease in a large population of blood samples was first considered seventy years ago. Since then, several methods have been used to approximate the minimum expected number of tests. The…

Applications · Statistics 2015-03-24 Seth Zimmerman

In the long-studied problem of combinatorial group testing, one is asked to detect a set of $k$ defective items out of a population of size $n$, using $m \ll n$ disjunctive measurements. In the non-adaptive setting, the most widely used…

Information Theory · Computer Science 2020-09-28 Mahdi Cheraghchi , Vasileios Nakos

The problem of Group Testing is to identify defective items out of a set of objects by means of pool queries of the form "Does the pool contain at least a defective?". The aim is of course to perform detection with the fewest possible…

Statistical Mechanics · Physics 2009-11-13 M. Mézard , M. Tarzia , C. Toninelli

Group testing can save testing resources in the context of the ongoing COVID-19 pandemic. In group testing, we are given $n$ samples, one per individual, and arrange them into $m < n$ pooled samples, where each pool is obtained by mixing a…

Applications · Statistics 2023-11-03 Ritesh Goenka , Shu-Jie Cao , Chau-Wai Wong , Ajit Rajwade , Dror Baron

The principal goal of Group Testing (GT) is to identify a small subset of "defective" items from a large population, by grouping items into as few test pools as possible. The test outcome of a pool is positive if it contains at least one…

Information Theory · Computer Science 2020-08-13 Alejandro Cohen , Asaf Cohen , Omer Gurewitz

In the problem of classical group testing one aims to identify a small subset (of size $d$) diseased individuals/defective items in a large population (of size $n$). This process is based on a minimal number of suitably-designed group tests…

Information Theory · Computer Science 2022-09-26 Xiwei Cheng , Sidharth Jaggi , Qiaoqiao Zhou

Non-adaptive group testing refers to the problem of inferring a sparse set of defectives from a larger population using the minimum number of simultaneous pooled tests. Recent positive results for noiseless group testing have motivated the…

Information Theory · Computer Science 2021-07-16 Gabriel Arpino , Nicolò Grometto , Afonso S. Bandeira

The group testing problem asks for efficient pooling schemes and algorithms that allow to screen moderately large numbers of samples for rare infections. The goal is to accurately identify the infected samples while conducting the least…

Artificial Intelligence · Computer Science 2021-05-19 AminCoja-Oghlan , Max Hahn-Klimroth , Philipp Loick , Manuel Penschuck

Large scale disease screening is a complicated process in which high costs must be balanced against pressing public health needs. When the goal is screening for infectious disease, one approach is group testing in which samples are…

Applications · Statistics 2021-03-02 Gregory Haber , Yaakov Malinovsky , Paul S. Albert

We analyze a new group testing scheme, termed semi-quantitative group testing, which may be viewed as a concatenation of an adder channel and a discrete quantizer. Our focus is on non-uniform quantizers with arbitrary thresholds. For the…

Information Theory · Computer Science 2015-06-26 Amin Emad , Olgica Milenkovic

Group testing is a well-known search problem that consists in detecting of $s$ defective members of a set of $t$ samples by carrying out tests on properly chosen subsets of samples. In classical group testing the goal is to find all…

Information Theory · Computer Science 2019-05-01 Ilya Vorobyev

We introduce a novel probabilistic group testing framework, termed Poisson group testing, in which the number of defectives follows a right-truncated Poisson distribution. The Poisson model has a number of new applications, including…

Information Theory · Computer Science 2023-07-19 Amin Emad , Olgica Milenkovic

The group testing problem concerns discovering a small number of defective items within a large population by performing tests on pools of items. A test is positive if the pool contains at least one defective, and negative if it contains no…

Information Theory · Computer Science 2026-05-15 Matthew Aldridge , Oliver Johnson , Jonathan Scarlett

Group testing is utilized in the case when we want to find a few defectives among large amount of items. Testing n items one by one requires n tests, but if the ratio of defectives is small, group testing is an efficient way to reduce the…

Computation · Statistics 2024-05-16 Hiroyasu Matsushima , Yusuke Tajima , Xiao-Nan Lu , Masakazu Jimbo

In this paper, we consider the problem of designing optimal pooling matrix for group testing (for example, for COVID-19 virus testing) with the constraint that no more than $r>0$ samples can be pooled together, which we call "dilution…

Quantitative Methods · Quantitative Biology 2020-08-06 Jirong Yi , Myung Cho , Xiaodong Wu , Raghu Mudumbai , Weiyu Xu

Non-adaptive group testing involves grouping arbitrary subsets of $n$ items into different pools. Each pool is then tested and defective items are identified. A fundamental question involves minimizing the number of pools required to…

Discrete Mathematics · Computer Science 2011-07-26 Mahdi Cheraghchi , Amin Karbasi , Soheil Mohajer , Venkatesh Saligrama

The corona virus disease 2019 (COVID-19) caused by the novel corona virus has an exponential rate of infection. COVID-19 is particularly notorious as the onset of symptoms in infected patients are usually delayed and there exists a large…

Methodology · Statistics 2020-04-16 Lakshmi N. Theagarajan