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Given an undirected graph $G$ and a multiset of $k$ terminal pairs $\mathcal{X}$, the Vertex-Disjoint Paths (\VDP) and Edge-Disjoint Paths (\EDP) problems ask whether $G$ has $k$ pairwise internally vertex-disjoint paths and $k$ pairwise…

Data Structures and Algorithms · Computer Science 2023-10-02 Juhi Chaudhary , Harmender Gahlawat , Michal Włodarczyk , Meirav Zehavi

We consider the problem of classifying graphs using graph kernels. We define a new graph kernel, called the generalized shortest path kernel, based on the number and length of shortest paths between nodes. For our example classification…

Data Structures and Algorithms · Computer Science 2015-11-20 Linus Hermansson , Fredrik D. Johansson , Osamu Watanabe

Given a digraph $D$, we say that a set of vertices $Q\subseteq V(D)$ is a $q$-kernel if $Q$ is an independent set and if every vertex of $D$ can be reached from $Q$ by a path of length at most $q$. In this paper, we initiate the study of…

Combinatorics · Mathematics 2024-07-19 Sam Spiro

We present a polyhedral description of kernels in orientations of line multigraphs. Given a digraph $D$, let $FK(D)$ denote the fractional kernel polytope defined on $D$, and let ${\sigma}(D)$ denote the linear system defining $FK(D)$. A…

Combinatorics · Mathematics 2015-10-08 Han Xiao

The line graph of a graph $G$ is the graph $L(G)$ whose vertex set is the edge set of $G$ and there is an edge between $e,f\in E(G)$ if $e$ and $f$ share an endpoint in $G$. A graph is called line graph if it is a line graph of some graph.…

Data Structures and Algorithms · Computer Science 2020-06-30 Eduard Eiben , William Lochet

Graph kernels are usually defined in terms of simpler kernels over local substructures of the original graphs. Different kernels consider different types of substructures. However, in some cases they have similar predictive performances,…

Machine Learning · Computer Science 2016-07-22 Nicolò Navarin , Alessandro Sperduti , Riccardo Tesselli

Provenance is a record that describes how entities, activities, and agents have influenced a piece of data; it is commonly represented as graphs with relevant labels on both their nodes and edges. With the growing adoption of provenance in…

Machine Learning · Computer Science 2021-09-16 David Kohan Marzagão , Trung Dong Huynh , Ayah Helal , Sean Baccas , Luc Moreau

An orientation $D$ of a graph $G=(V,E)$ is a digraph obtained from $G$ by replacing each edge by exactly one of the two possible arcs with the same end vertices. For each $v \in V(G)$, the indegree of $v$ in $D$, denoted by $d^-_D(v)$, is…

Computational Complexity · Computer Science 2020-12-01 Julio Araujo , Alexandre Cezar , Carlos V. G. C. Lima , Vinicius F. dos Santos , Ana Silva

Kernelization studies polynomial-time preprocessing algorithms. Over the last 20 years, the most celebrated positive results of the field have been linear kernels for classical NP-hard graph problems on sparse graph classes. In this paper,…

Data Structures and Algorithms · Computer Science 2025-11-06 Christian Bertram , Deborah Haun , Mads Vestergaard Jensen , Tuukka Korhonen

For a graph representation of a dataset, a straightforward normality measure for a sample can be its graph degree. Considering a weighted graph, degree of a sample is the sum of the corresponding row's values in a similarity matrix. The…

Machine Learning · Computer Science 2018-02-06 Caglar Aytekin , Francesco Cricri , Lixin Fan , Emre Aksu

Several algorithmic meta-theorems on kernelization have appeared in the last years, starting with the result of Bodlaender et al. [FOCS 2009] on graphs of bounded genus, then generalized by Fomin et al. [SODA 2010] to graphs excluding a…

Data Structures and Algorithms · Computer Science 2014-11-21 Valentin Garnero , Christophe Paul , Ignasi Sau , Dimitrios M. Thilikos

The class of graph deletion problems has been extensively studied in theoretical computer science, particularly in the field of parameterized complexity. Recently, a new notion of graph deletion problems was introduced, called deletion to…

Data Structures and Algorithms · Computer Science 2026-05-20 Ashwin Jacob , Diptapriyo Majumdar , Meirav Zehavi

For a set of graphs $\mathcal{H}$, the \textsc{$\mathcal{H}$-free Edge Deletion} problem asks to find whether there exist at most $k$ edges in the input graph whose deletion results in a graph without any induced copy of $H\in\mathcal{H}$.…

Data Structures and Algorithms · Computer Science 2014-11-19 N. R. Aravind , R. B. Sandeep , Naveen Sivadasan

The notion of a (polynomial) kernelization from parameterized complexity is a well-studied model for efficient preprocessing for hard computational problems. By now, it is quite well understood which parameterized problems do or…

Data Structures and Algorithms · Computer Science 2025-04-28 Leonid Antipov , Stefan Kratsch

In a digraph $D$,a quasi-kernel is an independent set $Q$ such that for every vertex $u$, there is a vertex $v \in Q$ satisfying $\text{dist}(v,u)\leq 2$. In 1974 Chv\'atal and Lov\'asz showed every digraph contains a quasi-kernel. In 1976,…

Combinatorics · Mathematics 2026-01-21 Alexander Clow

A nut graph is a simple graph whose kernel is spanned by a single full vector (i.e. the adjacency matrix has a single zero eigenvalue and all non-zero kernel eigenvectors have no zero entry). We classify generalisations of nut graphs to nut…

Combinatorics · Mathematics 2025-03-14 Nino Bašić , Patrick W. Fowler , Maxine M. McCarthy , Primož Potočnik

In the $k$-Leaf Out-Branching and $k$-Internal Out-Branching problems we are given a directed graph $D$ with a designated root $r$ and a nonnegative integer $k$. The question is to determine the existence of an outbranching rooted at $r$…

Data Structures and Algorithms · Computer Science 2015-09-08 Marthe Bonamy , Łukasz Kowalik , Michał Pilipczuk , Arkadiusz Socała

Given a digraph $G$, a set $X\subseteq V(G)$ is said to be absorbing set (resp. dominating set) if every vertex in the graph is either in $X$ or is an in-neighbour (resp. out-neighbour) of a vertex in $X$. A set $S\subseteq V(G)$ is said to…

Discrete Mathematics · Computer Science 2021-11-09 Mathew C. Francis , Pavol Hell , Dalu Jacob

In this paper we consider kernelization for problems on d-degenerate graphs, i.e. graphs such that any subgraph contains a vertex of degree at most $d$. This graph class generalizes many classes of graphs for which effective kernelization…

Data Structures and Algorithms · Computer Science 2013-06-25 Marek Cygan , Fabrizio Grandoni , Danny Hermelin

Graph-structured data arise in wide applications, such as computer vision, bioinformatics, and social networks. Quantifying similarities among graphs is a fundamental problem. In this paper, we develop a framework for computing graph…

Machine Learning · Statistics 2018-09-11 Zhen Zhang , Mianzhi Wang , Yijian Xiang , Yan Huang , Arye Nehorai