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This is the manual for the version 2 of HackAnalysis, a powerful, lightweight, versatile and, most importantly, hackable, recasting tool. New features in this version include: compressed event format storage for ultra-fast development;…

High Energy Physics - Phenomenology · Physics 2024-06-17 Mark D. Goodsell

We present a software framework for statistical data analysis, called HistFitter, that has been used extensively by the ATLAS Collaboration to analyze big datasets originating from proton-proton collisions at the Large Hadron Collider at…

High Energy Physics - Experiment · Physics 2015-06-23 M. Baak , G. J. Besjes , D. Cote , A. Koutsman , J. Lorenz , D. Short

The deep learning language of choice these days is Python; measured by factors such as available libraries and technical support, it is hard to beat. At the same time, software written in lower-level programming languages like C++ retain…

Computation and Language · Computer Science 2024-08-23 Thamme Gowda , Roman Grundkiewicz , Elijah Rippeth , Matt Post , Marcin Junczys-Dowmunt

This paper presents hep-aid, a modular Python library conceived for utilising, implementing, and developing parameter scan algorithms. Originally devised for sample-efficient, multi-objective active search approaches in computationally…

High Energy Physics - Phenomenology · Physics 2024-12-24 Mauricio A. Diaz , Srinandan Dasmahapatra , Stefano Moretti

Data frames in scripting languages are essential abstractions for processing structured data. However, existing data frame solutions are either not distributed (e.g., Pandas in Python) and therefore have limited scalability, or they are not…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-11 Ehsan Totoni , Wajih Ul Hassan , Todd A. Anderson , Tatiana Shpeisman

HyperNetX (HNX) is an open source Python library for the analysis and visualization of complex network data modeled as hypergraphs. Initially released in 2019, HNX facilitates exploratory data analysis of complex networks using algebraic…

Mathematical Software · Computer Science 2023-10-19 Brenda Praggastis , Sinan Aksoy , Dustin Arendt , Mark Bonicillo , Cliff Joslyn , Emilie Purvine , Madelyn Shapiro , Ji Young Yun

Motivated by the growing demand for low-precision arithmetic in computational science, we exploit lower-precision emulation in Python -- widely regarded as the dominant programming language for numerical analysis and machine learning.…

Machine Learning · Computer Science 2026-02-26 Erin Carson , Xinye Chen

Background: Ad hoc parsers are pieces of code that use common string functions like split, trim, or slice to effectively perform parsing. Whether it is handling command-line arguments, reading configuration files, parsing custom file…

Software Engineering · Computer Science 2023-04-20 Michael Schröder , Marc Goritschnig , Jürgen Cito

Cutting planes (cuts) play an important role in solving mixed-integer linear programs (MILPs), which formulate many important real-world applications. Cut selection heavily depends on (P1) which cuts to prefer and (P2) how many cuts to…

Artificial Intelligence · Computer Science 2024-04-22 Jie Wang , Zhihai Wang , Xijun Li , Yufei Kuang , Zhihao Shi , Fangzhou Zhu , Mingxuan Yuan , Jia Zeng , Yongdong Zhang , Feng Wu

Hardware generation languages (HGLs) increase hardware design productivity by creating parameterized modules and test benches. Unfortunately, existing tools are not widely adopted due to several demerits, including limited support for…

Hardware Architecture · Computer Science 2023-09-12 Jintao Sun , Zeke Wang , Tao Lu , Wenzhi Chen

We introduce pytrec_eval, a Python interface to the tree_eval information retrieval evaluation toolkit. pytrec_eval exposes the reference implementations of trec_eval within Python as a native extension. We show that pytrec_eval is around…

Information Retrieval · Computer Science 2018-06-06 Christophe Van Gysel , Maarten de Rijke

Algorithmic fairness has received considerable attention due to the failures of various predictive AI systems that have been found to be unfairly biased against subgroups of the population. Many approaches have been proposed to mitigate…

Machine Learning · Computer Science 2025-03-14 Agathe Fernandes Machado , Suzie Grondin , Philipp Ratz , Arthur Charpentier , François Hu

MIRGE is a computational approach for scientific computing based on NumPy-like array computation, but using lazy evaluation to recast computation as data-flow graphs, where nodes represent immutable, multi-dimensional arrays. Evaluation of…

This paper introduces a novel approach to automatic ahead-of-time (AOT) parallelization and optimization of sequential Python programs for execution on distributed heterogeneous platforms. Our approach enables AOT source-to-source…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-15 Jun Shirako , Akihiro Hayashi , Sri Raj Paul , Alexey Tumanov , Vivek Sarkar

Big data analytics requires high programmer productivity and high performance simultaneously on large-scale clusters. However, current big data analytics frameworks (e.g. Apache Spark) have prohibitive runtime overheads since they are…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-12 Ehsan Totoni , Todd A. Anderson , Tatiana Shpeisman

Cutting planes (cuts) are important for solving mixed-integer linear programs (MILPs), which formulate a wide range of important real-world applications. Cut selection -- which aims to select a proper subset of the candidate cuts to improve…

Machine Learning · Computer Science 2023-02-02 Zhihai Wang , Xijun Li , Jie Wang , Yufei Kuang , Mingxuan Yuan , Jia Zeng , Yongdong Zhang , Feng Wu

Multiple data views measured on the same set of participants is becoming more common and has the potential to deepen our understanding of many complex diseases by analyzing these different views simultaneously. Equally important, many of…

Methodology · Statistics 2023-10-13 J. Butts , C. Wendt , R. Bowler , C. P. Hersh , Q. Long , L. Eberly , S. E. Safo

Context. Inferring spectral parameters from X-ray data is one of the cornerstones of high-energy astrophysics, and is achieved using software stacks that have been developed over the last twenty years and more. However, as models get more…

Instrumentation and Methods for Astrophysics · Physics 2024-10-23 Simon Dupourqué , Didier Barret , Camille M. Diez , Sébastien Guillot , Erwan Quintin

This article presents Holistically-Attracted Wireframe Parsing (HAWP), a method for geometric analysis of 2D images containing wireframes formed by line segments and junctions. HAWP utilizes a parsimonious Holistic Attraction (HAT) field…

Computer Vision and Pattern Recognition · Computer Science 2023-09-07 Nan Xue , Tianfu Wu , Song Bai , Fu-Dong Wang , Gui-Song Xia , Liangpei Zhang , Philip H. S. Torr

Fourier transforms are an often necessary component in many computational tasks, and can be computed efficiently through the fast Fourier transform (FFT) algorithm. However, many applications involve an underlying continuous signal, and a…

Mathematical Software · Computer Science 2022-09-27 Eric Bezzam , Sepand Kashani , Paul Hurley , Martin Vetterli , Matthieu Simeoni