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We study the elasticity of cross-linked networks of thermally fluctuating stiff polymers. As compared to their purely mechanical counterparts, it is shown that these thermal networks have a qualitatively different elastic response. By…

Soft Condensed Matter · Physics 2007-05-23 Claus Heussinger , Erwin Frey

Based on a non-equilibrium mechanism for spatial pattern formation we study how position information can be controlled by locally coupled discrete dynamical networks, similar to gene regulation networks of cells in a developing…

Molecular Networks · Quantitative Biology 2009-08-26 Thimo Rohlf , Stefan Bornholdt

Large-scale networked systems typically operate under resource constraints, and it is also difficult to exactly obtain the network structure between nodes. To address these issues, this paper investigates a sparse optimal control for…

Optimization and Control · Mathematics 2025-07-25 Takuya Ikeda , Masaaki Nagahara

Gene regulatory networks typically have low in-degrees, whereby any given gene is regulated by few of the genes in the network. What mechanisms might be responsible for these low in-degrees? Starting with an accepted framework of the…

Molecular Networks · Quantitative Biology 2009-10-22 Z. Burda , A. Krzywicki , O. C. Martin , M. Zagorski

This paper demonstrates that grokking behavior in modular arithmetic with a modulus P in a neural network can be controlled by modifying the profile of the activation function as well as the depth and width of the model. Plotting the even…

Machine Learning · Computer Science 2024-11-11 Ahmed Salah , David Yevick

Large scale models of physical phenomena demand the development of new statistical and computational tools in order to be effective. Many such models are `sloppy', i.e., exhibit behavior controlled by a relatively small number of parameter…

Soft interfaces formed by lipid membranes are fundamental to living cells, synthetic cells, and membrane-based soft materials. However, a quantitative framework linking molecular organization with nonlinear interfacial mechanics remains…

Soft Condensed Matter · Physics 2026-01-27 Kazutoshi Masuda , Miho Yanagisawa

The hygro-thermo-expansive response of fibrous networks involves deformation phenomena at multiple length scales. The moisture or temperature induced expansion of individual fibres is transmitted in the network through the inter-fibre…

Soft Condensed Matter · Physics 2017-03-29 E. Bosco , R. H. J. Peerlings , M. G. D. Geers

Rigid body interactions are fundamental to numerous scientific disciplines, but remain challenging to simulate due to their abrupt nonlinear nature and sensitivity to complex, often unknown environmental factors. These challenges call for…

Machine Learning · Computer Science 2025-07-28 Amaury Wei , Olga Fink

Logic-Geometric Programming (LGP) is a powerful motion and manipulation planning framework, which represents hierarchical structure using logic rules that describe discrete aspects of problems, e.g., touch, grasp, hit, or push, and solves…

Robotics · Computer Science 2020-03-10 Jung-Su Ha , Danny Driess , Marc Toussaint

Upon a matrix representation of a binary bipartite network, via the permutation invariance, a coupling geometry is computed to approximate the minimum energy macrostate of a network's system. Such a macrostate is supposed to constitute the…

Applications · Statistics 2018-02-02 Jiahui Guan , Hsieh Fushing

Disordered spring networks are a useful paradigm to examine macroscopic mechanical properties of amorphous materials. Here, we study the elastic behavior of under-constrained spring networks, i.e.\ networks with more degrees of freedom than…

Soft Condensed Matter · Physics 2023-01-18 Cheng-Tai Lee , Matthias Merkel

Active materials take advantage of their internal sources of energy to self-organize in an automated manner. This feature provides a novel opportunity to design micron-scale machines with minimal required control. However, self-organization…

Soft Condensed Matter · Physics 2021-01-22 Zijie Qu , Jialong Jiang , Heun Jin Lee , Rob Phillips , Shahriar Shadkhoo , Matt Thomson

Fibrous networks are ideal functional materials since they provide mechanical rigidity at low weight. Such structures are omnipresent in natural biomaterials from cells to tissues, as well as in man-made materials from polymeric composites…

Deep learning models have been shown to be vulnerable to adversarial attacks. This perception led to analyzing deep learning models not only from the perspective of their performance measures but also their robustness to certain types of…

Machine Learning · Computer Science 2021-10-13 M. Ben Amor , J. Stier , M. Granitzer

Network embedding methods aim at learning low-dimensional latent representation of nodes in a network. These representations can be used as features for a wide range of tasks on graphs such as classification, clustering, link prediction,…

Social and Information Networks · Computer Science 2018-08-09 Haochen Chen , Bryan Perozzi , Rami Al-Rfou , Steven Skiena

Network equilibrium models represent a versatile tool for the analysis of interconnected objects and their relationships. They have been widely employed in both science and engineering to study the behavior of complex systems under various…

Adaptation and Self-Organizing Systems · Physics 2024-10-31 Omar Aloui , David Orden , Nizar Bel Hadj Ali , Landolf Rhode-Barbarigos

Turing patterns, arising from the interplay between competing species of diffusive particles, has long been an important concept for describing non-equilibrium self-organization in nature, and has been extensively investigated in many…

Pattern Formation and Solitons · Physics 2023-06-26 Jasper van der Kolk , Guillermo García-Pérez , Nikos E. Kouvaris , M. Ángeles Serrano , Marián Boguñá

We propose Sparse Neural Network architectures that are based on random or structured bipartite graph topologies. Sparse architectures provide compression of the models learned and speed-ups of computations, they can also surpass their…

Machine Learning · Computer Science 2017-06-20 Alfred Bourely , John Patrick Boueri , Krzysztof Choromonski

The output of physical systems is often accessible by measurements such as the 3D position of a robotic arm actuated by many actuators or the speckle patterns formed by shining the spot of a laser pointer on a wall. The selection of the…