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Large-scale perturbations in the microbiome constitution are strongly correlated, whether as a driver or a consequence, with the health and functioning of human physiology. However, understanding the difference in the microbiome profiles of…

Quantitative Methods · Quantitative Biology 2022-09-08 Kateryna Melnyk , Kuba Weimann , Tim O. F. Conrad

Most real optimization problems are defined over a mixed search space where the variables are both discrete and continuous. In engineering applications, the objective function is typically calculated with a numerically costly black-box…

Optimization and Control · Mathematics 2022-05-04 Jhouben Cuesta-Ramirez , Rodolphe Le Riche , Olivier Roustant , Guillaume Perrin , Cedric Durantin , Alain Gliere

Optimizing paths on networks is crucial for many applications, from subway traffic to Internet communication. As global path optimization that takes account of all path-choices simultaneously is computationally hard, most existing routing…

Physics and Society · Physics 2013-09-05 Chi Ho Yeung , David Saad , K. Y. Michael Wong

This paper proposes an optimization-based framework for the analysis of multiperiod directed multihypergraphs aimed at identifying self-amplifying structures that sustain endogenous growth in complex systems. The approach captures the…

Optimization and Control · Mathematics 2026-04-15 Víctor Blanco , Ricardo Gázquez , Juan Francisco Ocaña-Rivas

A graphical model is a statistical model that is associated to a graph whose nodes correspond to variables of interest. The edges of the graph reflect allowed conditional dependencies among the variables. Graphical models admit…

Methodology · Statistics 2016-06-09 Mathias Drton , Marloes H. Maathuis

In this paper, we develop a fast mixed-integer convex programming (MICP) framework for multi-robot navigation by combining graph attention networks and distributed optimization. We formulate a mixed-integer optimization problem for receding…

Systems and Control · Electrical Eng. & Systems 2025-03-28 Viet-Anh Le , Panagiotis Kounatidis , Andreas A. Malikopoulos

We address the problem of merging graph and feature-space information while learning a metric from structured data. Existing algorithms tackle the problem in an asymmetric way, by either extracting vectorized summaries of the graph…

Machine Learning · Computer Science 2020-02-17 Nicolo Colombo

Topological metrics of graphs provide a natural way to describe the prominent features of various types of networks. Graph metrics describe the structure and interplay of graph edges and have found applications in many scientific fields. In…

Data Structures and Algorithms · Computer Science 2018-06-21 Loukianos Spyrou , Javier Escudero

We develop a novel data-driven nonlinear mixup mechanism for graph data augmentation and present different mixup functions for sample pairs and their labels. Mixup is a data augmentation method to create new training data by linearly…

Machine Learning · Computer Science 2022-10-31 Madeline Navarro , Santiago Segarra

When facing graph signal processing tasks, the workhorse assumption is that the graph describing the support of the signals is known. However, in many relevant applications the available graph suffers from observation errors and…

Signal Processing · Electrical Eng. & Systems 2024-12-03 Samuel Rey , Victor M. Tenorio , Antonio G. Marques

Graph autoencoders (GAEs) are powerful tools in representation learning for graph embedding. However, the performance of GAEs is very dependent on the quality of the graph structure, i.e., of the adjacency matrix. In other words, GAEs would…

Machine Learning · Computer Science 2021-03-24 Rui Zhang , Yunxing Zhang , Xuelong Li

Machine learning on graphs is an important and ubiquitous task with applications ranging from drug design to friendship recommendation in social networks. The primary challenge in this domain is finding a way to represent, or encode, graph…

Social and Information Networks · Computer Science 2018-04-11 William L. Hamilton , Rex Ying , Jure Leskovec

This work introduces a novel algorithm for finding the connected components of a graph where the vertices and edges are grouped into sets defining a Set--Based Graph. The algorithm, under certain restrictions on those sets, has the…

Data Structures and Algorithms · Computer Science 2020-11-30 Ernesto Kofman , Denise Marzorati , Joaquín Fernández

We examine two fundamental tasks associated with graph representation learning: link prediction and semi-supervised node classification. We present a novel autoencoder architecture capable of learning a joint representation of both local…

Machine Learning · Computer Science 2019-03-12 Phi Vu Tran

A main challenge in mining network-based data is finding effective ways to represent or encode graph structures so that it can be efficiently exploited by machine learning algorithms. Several methods have focused in network representation…

Social and Information Networks · Computer Science 2019-03-18 Leonardo Gutiérrez-Gómez , Jean-Charles Delvenne

Collaborative decision-making is an essential capability for multi-robot systems, such as connected vehicles, to collaboratively control autonomous vehicles in accident-prone scenarios. Under limited communication bandwidth, capturing…

Robotics · Computer Science 2023-11-01 Peng Gao , Yu Shen , Ming C. Lin

Abusive behaviors are common on online social networks. The increasing frequency of antisocial behaviors forces the hosts of online platforms to find new solutions to address this problem. Automating the moderation process has thus received…

Social and Information Networks · Computer Science 2021-01-21 Noé Cecillon , Vincent Labatut , Richard Dufour , Georges Linares

Graph representation learning has become a hot research topic due to its powerful nonlinear fitting capability in extracting representative node embeddings. However, for sequential data such as speech signals, most traditional methods…

Sound · Computer Science 2024-05-08 Yingxue Gao , Huan Zhao , Zixing Zhang

Joint modeling of multiview graphs with a common set of nodes between views and auxiliary predictors is an essential, yet less explored, area in statistical methodology. Traditional approaches often treat graphs in different views as…

Methodology · Statistics 2026-03-24 Sharmistha Guha , Jose Rodriguez-Acosta , Ivo Dinov

We study multi-marginal optimal transport (MOT) problems where the underlying cost has a graphical structure. These graphical multi-marginal optimal transport problems have found applications in several domains including traffic flow…

Optimization and Control · Mathematics 2025-12-02 Jiaojiao Fan , Isabel Haasler , Qinsheng Zhang , Johan Karlsson , Yongxin Chen