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Related papers: HarmonicBalance.jl: A Julia suite for nonlinear dy…

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InvertibleNetworks.jl is a Julia package designed for the scalable implementation of normalizing flows, a method for density estimation and sampling in high-dimensional distributions. This package excels in memory efficiency by leveraging…

Machine Learning · Computer Science 2023-12-22 Rafael Orozco , Philipp Witte , Mathias Louboutin , Ali Siahkoohi , Gabrio Rizzuti , Bas Peters , Felix J. Herrmann

Proprietary closed-source software is still the norm in advanced process control. Transparency and reproducibility are key aspects of scientific research. Free and open-source toolkit can contribute to the development, sharing and…

Systems and Control · Electrical Eng. & Systems 2026-05-07 Francis Gagnon , Alex Thivierge , André Desbiens , Fredrik Bagge Carlson

SpiDy.jl solves the non-Markovian stochastic dynamics of interacting classical spin vectors and harmonic oscillator networks in contact with a dissipative environment. The methods implemented allow the user to include arbitrary memory…

Computational Physics · Physics 2024-05-31 Stefano Scali , Simon Horsley , Janet Anders , Federico Cerisola

PowerSimulations.jl is a Julia-based BSD-licensed power system operations simulation tool developed as a flexible and open source software for quasi-static power systems simulations including Production Cost Models. PowerSimulations.jl…

Systems and Control · Electrical Eng. & Systems 2024-04-05 Jose Daniel Lara , Clayton Barrows , Daniel Thom , Sourabh Dalvi , Duncan S. Callaway , Dheepak Krishnamurthy

We present NEP-PACK a novel open-source library for the solution of nonlinear eigenvalue problems (NEPs). The package provides a framework to represent NEPs, as well as efficient implementations of many state-of-the-art algorithms. The…

Numerical Analysis · Mathematics 2018-11-26 Elias Jarlebring , Max Bennedich , Giampaolo Mele , Emil Ringh , Parikshit Upadhyaya

Real applications in structural mechanics, where the dynamic behavior is linear, are rare. Usually, structures are made of components assembled together by means of joints whose behavior maybe highly nonlinear. Depending on the amount of…

Dynamical Systems · Mathematics 2018-11-26 Stefano Zucca , Christian M. Firrone

Motivation: Flux balance analysis, and its variants, are widely used methods for predicting steady-state reaction rates in biochemical reaction networks. The exploration of high dimensional networks with such methods is currently hampered…

Quantitative Methods · Quantitative Biology 2016-11-17 Laurent Heirendt , Ronan M. T. Fleming , Ines Thiele

We introduce Metatheory.jl: a lightweight and performant general purpose symbolics and metaprogramming framework meant to simplify the act of writing complex Julia metaprograms and to significantly enhance Julia with a native term rewriting…

Programming Languages · Computer Science 2021-04-14 Alessandro Cheli

The harmonic balance (HB) method is widely used in the literature for analyzing the periodic solutions of nonlinear mechanical systems. The objective of this paper is to exploit the method for bifurcation analysis, i.e., for the detection…

Dynamical Systems · Mathematics 2016-04-20 Thibaut Detroux , Ludovic Renson , Luc Masset , Gaetan Kerschen

We present an efficient numerical implementation of the quasi-classical doorway-window approximation, specifically designed for on-the-fly simulations of time-resolved nonlinear spectroscopic signals in the Julia package WaveMixings.jl. The…

Chemical Physics · Physics 2025-09-05 Luis Vasquez , Sebastian Pios , Lipeng Chen , Zhenggang Lan , Wolfgang Domcke , Maxim Gelin

Stochastic dominance is a fundamental concept in decision-making under uncertainty and quantitative finance, yet its practical application is hindered by computational intractability due to infinitely many constraints. We introduce the…

Optimization and Control · Mathematics 2025-02-27 Rajmadan Lakshmanan , Alois Pichler

We present an open-source Julia-based software toolkit for solving the phase problem using dual-space iterative algorithms. The toolkit is specifically designed for aperiodic crystals and quasicrystals, supporting general space group…

Other Condensed Matter · Physics 2025-11-19 Pavel Kalugin

MicroMagnetic.jl is an open-source Julia package for micromagnetic and atomistic simulations. Using the features of the Julia programming language, MicroMagnetic.jl supports CPU and various GPU platforms, including NVIDIA, AMD, Intel, and…

Mesoscale and Nanoscale Physics · Physics 2024-09-09 Weiwei Wang , Boyao Lyu , Lingyao Kong , Hans Fangohr , Haifeng Du

Biological systems with intertwined feedback loops pose a challenge to mathematical modeling efforts. Moreover, rare events, such as mutation and extinction, complicate system dynamics. Stochastic simulation algorithms are useful in…

Quantitative Methods · Quantitative Biology 2018-12-10 Alfonso Landeros , Timothy Stutz , Kevin L. Keys , Alexander Alekseyenko , Janet S. Sinsheimer , Kenneth Lange , Mary Sehl

In this paper, we describe a numerical continuation method that enables harmonic analysis of nonlinear periodic oscillators. This method is formulated as a boundary value problem that can be readily implemented by resorting to a standard…

Dynamical Systems · Mathematics 2015-05-19 Federico Bizzarri , Daniele Linaro , Bart Oldeman , Marco Storace

We describe a package realized in the Julia programming language which performs symbolic manipulations applied to nonlinear evolution equations, their flows, and commutators of such objects. This tool was employed to perform contrived…

Numerical Analysis · Mathematics 2016-05-03 Winfried Auzinger , Harald Hofstaetter , Othmar Koch

The consideration of stochastic uncertainty in optimal and predictive control is a well-explored topic. Recently Polynomial Chaos Expansions (PCE) have received considerable attention for problems involving stochastically uncertain system…

Systems and Control · Electrical Eng. & Systems 2026-04-28 Ruchuan Ou , Learta Januzi , Jonas Schießl , Michael Heinrich Baumann , Lars Grüne , Timm Faulwasser

Sunny is a Julia package designed to serve the needs of the quantum magnetism community. It supports the specification of a very broad class of spin models and a diverse suite of numerical solvers. These include powerful methods for…

The importance of computers is continually increasing in radiotherapy. Efficient algorithms, implementations and the ability to leverage advancements in computer science are crucial to improve cancer care even further and deliver the best…

Medical Physics · Physics 2024-07-08 Renato Bellotti , Antony J. Lomax , Andreas Adelmann , Jan Hrbacek

Thermodynamic models are often vital when characterising complex systems, particularly natural gas, electrolyte, polymer, pharmaceutical and biological systems. However, their implementations have historically been abstruse and cumbersome,…

Computational Physics · Physics 2025-06-26 Pierre J. Walker , Hon-Wa Yew , Andrés Riedemann