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Neural responses encode information that is useful for a variety of downstream tasks. A common approach to understand these systems is to build regression models or ``decoders'' that reconstruct features of the stimulus from neural…

Machine Learning · Statistics 2024-11-14 Sarah E. Harvey , David Lipshutz , Alex H. Williams

Recent work has sought to understand the behavior of neural networks by comparing representations between layers and between different trained models. We examine methods for comparing neural network representations based on canonical…

Machine Learning · Computer Science 2019-07-22 Simon Kornblith , Mohammad Norouzi , Honglak Lee , Geoffrey Hinton

Comparing learned neural representations in neural networks is a challenging but important problem, which has been approached in different ways. The Centered Kernel Alignment (CKA) similarity metric, particularly its linear variant, has…

Machine Learning · Computer Science 2022-11-17 MohammadReza Davari , Stefan Horoi , Amine Natik , Guillaume Lajoie , Guy Wolf , Eugene Belilovsky

Decoding approaches are widely used in neuroscience and machine learning to compare stimulus representations across neural systems, such as different brain regions, organisms, and deep learning models. Popular methods include decoding…

Neurons and Cognition · Quantitative Biology 2026-05-08 Johannes Bertram , Luciano Dyballa , T. Anderson Keller , Savik Kinger , Steven W. Zucker

Understanding representational similarity between neural recordings and computational models is essential for neuroscience, yet remains challenging to measure reliably due to the constraints on the number of neurons that can be recorded…

Disordered Systems and Neural Networks · Physics 2025-10-27 Hyunmo Kang , Abdulkadir Canatar , SueYeon Chung

To understand neural network behavior, recent works quantitatively compare different networks' learned representations using canonical correlation analysis (CCA), centered kernel alignment (CKA), and other dissimilarity measures.…

Machine Learning · Computer Science 2021-11-04 Frances Ding , Jean-Stanislas Denain , Jacob Steinhardt

A multitude of (dis)similarity measures between neural network representations have been proposed, resulting in a fragmented research landscape. Most of these measures fall into one of two categories. First, measures such as linear…

Machine Learning · Statistics 2023-11-21 Sarah E. Harvey , Brett W. Larsen , Alex H. Williams

Representational similarity metrics are fundamental tools in neuroscience and AI, yet we lack systematic comparisons of their discriminative power across model families. We introduce a quantitative framework to evaluate representational…

Machine Learning · Computer Science 2025-12-10 Jialin Wu , Shreya Saha , Yiqing Bo , Meenakshi Khosla

Representational Similarity Analysis (RSA) is a technique developed by neuroscientists for comparing activity patterns of different measurement modalities (e.g., fMRI, electrophysiology, behavior). As a framework, RSA has several advantages…

Computation and Language · Computer Science 2019-09-06 Mostafa Abdou , Artur Kulmizev , Felix Hill , Daniel M. Low , Anders Søgaard

Representational similarity analysis (RSA) is a multivariate technique to investigate cortical representations of objects or constructs. While avoiding ill-posed matrix inversions that plague multivariate approaches in the presence of many…

Methodology · Statistics 2021-12-03 Roberto Viviani

How do we know if two systems - biological or artificial - process information in a similar way? Similarity measures such as linear regression, Centered Kernel Alignment (CKA), Normalized Bures Similarity (NBS), and angular Procrustes…

Neurons and Cognition · Quantitative Biology 2024-12-31 Nathan Cloos , Moufan Li , Markus Siegel , Scott L. Brincat , Earl K. Miller , Guangyu Robert Yang , Christopher J. Cueva

Representational Similarity Analysis (RSA) is a popular method for analyzing neuroimaging and behavioral data. Here we evaluate the accuracy and reliability of RSA in the context of model selection, and compare it to that of regression.…

Methodology · Statistics 2025-11-18 Chuanji Gao , Gang Chen , Svetlana V. Shinkareva , Rutvik H. Desai

Comparing different neural network representations and determining how representations evolve over time remain challenging open questions in our understanding of the function of neural networks. Comparing representations in neural networks…

Machine Learning · Statistics 2018-10-25 Ari S. Morcos , Maithra Raghu , Samy Bengio

Centered Kernel Alignment (CKA) was recently proposed as a similarity metric for comparing activation patterns in deep networks. Here we experiment with the modified RV-coefficient (RV2), which has very similar properties as CKA while being…

Machine Learning · Computer Science 2019-12-06 Jessica A. F. Thompson , Yoshua Bengio , Marc Schoenwiesner

In both artificial and biological systems, the centered kernel alignment (CKA) has become a widely used tool for quantifying neural representation similarity. While current CKA estimators typically correct for the effects of finite stimuli…

Neurons and Cognition · Quantitative Biology 2025-02-26 Chanwoo Chun , Abdulkadir Canatar , SueYeon Chung , Daniel D. Lee

Centered kernel alignment (CKA) is a popular metric for comparing representations, determining equivalence of networks, and neuroscience research. However, CKA does not account for the underlying manifold and relies on numerous heuristics…

Machine Learning · Computer Science 2025-10-28 Mohammad Tariqul Islam , Du Liu , Deblina Sarkar

Similarity analysis is one of the crucial steps in most fMRI studies. Representational Similarity Analysis (RSA) can measure similarities of neural signatures generated by different cognitive states. This paper develops Deep…

Image and Video Processing · Electrical Eng. & Systems 2020-10-06 Muhammad Yousefnezhad , Jeffrey Sawalha , Alessandro Selvitella , Daoqiang Zhang

Representational similarity analysis (RSA) tests models of brain computation by investigating how neural activity patterns reflect experimental conditions. Instead of predicting activity patterns directly, the models predict the geometry of…

Analyzing the similarity of internal representations has been an important technique for understanding the behavior of deep neural networks. Most existing methods for analyzing the similarity between representations of high dimensions, such…

Artificial Intelligence · Computer Science 2025-05-26 Jiachen Jiang , Jinxin Zhou , Zhihui Zhu

The extent to which different neural or artificial neural networks (models) rely on equivalent representations to support similar tasks remains a central question in neuroscience and machine learning. Prior work has typically compared…

Neurons and Cognition · Quantitative Biology 2026-04-06 Jialin Wu , Shreya Saha , Yiqing Bo , Meenakshi Khosla
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