Related papers: The Gapped $k$-Deck Problem

In the $(k,h)$-SetCover problem, we are given a collection $\mathcal{S}$ of sets over a universe $U$, and the goal is to distinguish between the case that $\mathcal{S}$ contains $k$ sets which cover $U$, from the case that at least $h$ sets…

Let $G$ be an additive finite abelian group and let $k\in [\exp(G),\mathsf{D}(G)-1]$ be a positive integer. Denote by $\mathsf{s}_{\leq k}(G)$ the smallest positive integer $l\in \mathbb{N}\cup \{+\infty\}$ such that each sequence of length…

A $k$-star is a complete bipartite graph $K_{1,k}$. For a graph $G$, a $k$-star decomposition of $G$ is a set of $k$-stars in $G$ whose edge sets partition the edge set of $G$. If we weaken this condition to only demand that each edge of…

The palindromic fingerprint of a string $S[1\ldots n]$ is the set $PF(S) = \{(i,j)~|~ S[i\ldots j] \textit{ is a maximal }\\ \textit{palindrome substring of } S\}$. In this work, we consider the problem of string reconstruction from a…

The $k$-cut problem asks, given a connected graph $G$ and a positive integer $k$, to find a minimum-weight set of edges whose removal splits $G$ into $k$ connected components. We give the first polynomial-time algorithm with approximation…

Generally, a graph G, an independent set is a subset S of vertices in G such that no two vertices in S are adjacent (connected by an edge) and a vertex cover is a subset S of vertices such that each edge of G has at least one of its…

In this paper, we study for the first time the Diverse Longest Common Subsequences (LCSs) problem under Hamming distance. Given a set of a constant number of input strings, the problem asks to decide if there exists some subset $\mathcal X$…

The problem of reconstructing strings from their substring spectra has a long history and in its most simple incarnation asks for determining under which conditions the spectrum uniquely determines the string. We study the problem of coded…

The {\em shortest common superstring} and the {\em shortest common supersequence} are two well studied problems having a wide range of applications. In this paper we consider both problems with resource constraints, denoted as the…

The Densest $k$-Subgraph (D$k$S) problem, and its corresponding minimization problem Smallest $p$-Edge Subgraph (S$p$ES), have come to play a central role in approximation algorithms. This is due both to their practical importance, and…

We introduce a graph partitioning problem motivated by computational topology and propose two algorithms that produce approximate solutions. Specifically, given a weighted, undirected graph $G$ and a positive integer $k$, we desire to find…

In the trace reconstruction problem our goal is to learn an unknown string $x\in \{0,1\}^n$ given independent traces of $x$. A trace is obtained by independently deleting each bit of $x$ with some probability $\delta$ and concatenating the…

The cage problem concerns finding $(k,g)$-graphs, which are $k$-regular graphs with girth $g$, of the smallest possible number of vertices. The central goal is to determine $n(k,g)$, the minimum order of such a graph, and to identify…

Let $t$ and $k$ be a positive integers, and let $I_k=\{i\in \mathbb{Z}:\; -k\leq i\leq k\}$. Let $\mathsf{s}'_t(I_k)$ be the smallest positive integer $\ell$ such that every zero-sum sequence $S$ over $I_k$ of length $|S|\ge \ell$ contains…

We consider the problem of minimizing the size of a family of sets G such that every subset of 1,...,n can be written as a disjoint union of at most k members of G, where k and n are given numbers. This problem originates in a real-world…

The tableau reconstruction problem, posed by Monks (2009), asks the following. Starting with a standard Young tableau $T$, a 1-minor of $T$ is a tableau obtained by first deleting any cell of $T$, and then performing jeu de taquin slides to…

We revisit the \textsc{$k$-Secluded Tree} problem. Given a vertex-weighted undirected graph $G$, its objective is to find a maximum-weight induced subtree $T$ whose open neighborhood has size at most $k$. We present a fixed-parameter…

Motivated by mass-spectrometry protein sequencing, we consider a simply-stated problem of reconstructing a string from the multiset of its substring compositions. We show that all strings of length 7, one less than a prime, or one less than…

One of the most basic results in graph theory states that every graph with at least two vertices has two vertices with the same degree. Since there are graphs without $3$ vertices of the same degree, it is natural to ask if for any fixed…

Let v(G) be the number of vertices and t(G,k) the maximum number of disjoint k-edge trees in G. In this paper we show that (a1) if G is a graph with every vertex of degree at least two and at most s, where s > 3, then t(G,2) is at least…