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Recent advances in machine learning research have produced powerful neural graph embedding methods, which learn useful, low-dimensional vector representations of network data. These neural methods for graph embedding excel in graph machine…

Physics and Society · Physics 2024-11-05 Sadamori Kojaku , Filippo Radicchi , Yong-Yeol Ahn , Santo Fortunato

Graph embedding provides a feasible methodology to conduct pattern classification for graph-structured data by mapping each data into the vectorial space. Various pioneering works are essentially coding method that concentrates on a…

Machine Learning · Computer Science 2022-10-04 Xue Liu , Dan Sun , Xiaobo Cao , Hao Ye , Wei Wei

This paper shows that graph spectral embedding using the random walk Laplacian produces vector representations which are completely corrected for node degree. Under a generalised random dot product graph, the embedding provides uniformly…

Methodology · Statistics 2021-05-05 Alexander Modell , Patrick Rubin-Delanchy

In this work, we theoretically demonstrate that current graph positional encodings (PEs) are not beneficial and could potentially hurt performance in tasks involving heterophilous graphs, where nodes that are close tend to have different…

Machine Learning · Computer Science 2025-04-30 Michael Ito , Jiong Zhu , Dexiong Chen , Danai Koutra , Jenna Wiens

\Graph similarity computation is an essential task in many real-world graph-related applications such as retrieving the similar drugs given a query chemical compound or finding the user's potential friends from the social network database.…

Machine Learning · Computer Science 2024-12-18 Jingjing Wang , Hongjie Zhu , Haoran Xie , Fu Lee Wang , Xiaoliang Xu , Yuxiang Wang

The second eigenvalue of the Laplacian matrix and its associated eigenvector are fundamental features of an undirected graph, and as such they have found widespread use in scientific computing, machine learning, and data analysis. In many…

Data Structures and Algorithms · Computer Science 2011-10-24 Michael W. Mahoney , Lorenzo Orecchia , Nisheeth K. Vishnoi

In this paper we propose a new approach to detect clusters in undirected graphs with attributed vertices. We incorporate structural and attribute similarities between the vertices in an augmented graph by creating additional vertices and…

Machine Learning · Computer Science 2023-02-07 Pasqua D'Ambra , Panayot S. Vassilevski , Luisa Cutillo

Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs…

Machine Learning · Computer Science 2021-05-18 Yunsheng Bai , Hao Ding , Yizhou Sun , Wei Wang

For graph classification tasks, many traditional kernel methods focus on measuring the similarity between graphs. These methods have achieved great success on resolving graph isomorphism problems. However, in some classification problems,…

Machine Learning · Computer Science 2021-02-18 Jianming Huang , Hiroyuki Kasai

The Laplacian matrix of a simple graph is the difference of the diagonal matrix of vertex degree and the (0,1) adjacency matrix. In the past decades, the Laplacian spectrum has received much more and more attention, since it has been…

Combinatorics · Mathematics 2013-10-31 Xiao-Dong Zhang

We present clustering methods for multivariate data exploiting the underlying geometry of the graphical structure between variables. As opposed to standard approaches that assume known graph structures, we first estimate the edge structure…

Methodology · Statistics 2015-09-28 Sayantan Banerjee , Rehan Akbani , Veerabhadran Baladandayuthapani

Graph disaggregation is a technique used to address the high cost of computation for power law graphs on parallel processors. The few high-degree vertices are broken into multiple small-degree vertices, in order to allow for more efficient…

Numerical Analysis · Mathematics 2016-05-04 Xiaozhe Hu , John C. Urschel , Ludmil T. Zikatanov

Graph Edit Distance (GED) is a fundamental, albeit NP-hard, metric for structural graph similarity. Recent neural graph matching architectures approximate GED by first encoding graphs with a Graph Neural Network (GNN) and then applying…

Machine Learning · Computer Science 2026-05-08 Jyotirmaya Shivottam , Subhankar Mishra

Graph alignment, the problem of identifying corresponding nodes across multiple graphs, is fundamental to numerous applications. Most existing unsupervised methods embed node features into latent representations to enable cross-graph…

Machine Learning · Computer Science 2025-09-30 Maysam Behmanesh , Erkan Turan , Maks Ovsjanikov

Learning a graph with a specific structure is essential for interpretability and identification of the relationships among data. It is well known that structured graph learning from observed samples is an NP-hard combinatorial problem. In…

Machine Learning · Statistics 2019-09-26 Sandeep Kumar , Jiaxi Ying , Jos'e Vin'icius de M. Cardoso , Daniel P. Palomar

Because of the significant increase in size and complexity of the networks, the distributed computation of eigenvalues and eigenvectors of graph matrices has become very challenging and yet it remains as important as before. In this paper…

Numerical Analysis · Mathematics 2017-11-27 Konstantin Avrachenkov , Philippe Jacquet , Jithin Sreedharan

We study the problem of recovering a globally consistent Euclidean embedding of data, given only a local distance graph and propose a method that optimally represents these distances. The method operates solely on a neighborhood graph…

Machine Learning · Computer Science 2026-05-20 Dimitris Arabadjis

The graph is one of the most widely used mathematical structures in engineering and science because of its representational power and inherent ability to demonstrate the relationship between objects. The objective of this work is to…

Data Structures and Algorithms · Computer Science 2021-01-01 Shri Prakash Dwivedi

The need for efficiently comparing and representing datasets with unknown alignment spans various fields, from model analysis and comparison in machine learning to trend discovery in collections of medical datasets. We use manifold learning…

Machine Learning · Statistics 2022-07-13 Tal Shnitzer , Mikhail Yurochkin , Kristjan Greenewald , Justin Solomon

We are interested in multilayer graph clustering, which aims at dividing the graph nodes into categories or communities. To do so, we propose to learn a clustering-friendly embedding of the graph nodes by solving an optimization problem…

Machine Learning · Computer Science 2021-03-31 Mireille El Gheche , Pascal Frossard