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This paper introduces a novel approach to probabilistic deep learning, kernel density matrices, which provide a simpler yet effective mechanism for representing joint probability distributions of both continuous and discrete random…

Machine Learning · Computer Science 2024-05-01 Fabio A. González , Raúl Ramos-Pollán , Joseph A. Gallego-Mejia

During the past decade, Deep Learning (DL) algorithms, programming systems and hardware have converged with the High Performance Computing (HPC) counterparts. Nevertheless, the programming methodology of DL and HPC systems is stagnant,…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-19 Evangelos Georganas , Dhiraj Kalamkar , Kirill Voronin , Abhisek Kundu , Antonio Noack , Hans Pabst , Alexander Breuer , Alexander Heinecke

We present a fast algorithm for linear least squares problems governed by hierarchically block separable (HBS) matrices. Such matrices are generally dense but data-sparse and can describe many important operators including those derived…

Numerical Analysis · Mathematics 2014-06-17 Kenneth L. Ho , Leslie Greengard

Boundary integral equations lead to dense system matrices when discretized, yet they are data-sparse. Using the $\mathcal{H}$-matrix format, this sparsity is exploited to achieve $\mathcal{O}(N\log N)$ complexity for storage and…

Numerical Analysis · Mathematics 2025-05-22 Kobe Bruyninckx , Daan Huybrechs , Karl Meerbergen

We propose fast and practical quantum-inspired classical algorithms for solving linear systems. Specifically, given sampling and query access to a matrix $A\in\mathbb{R}^{m\times n}$ and a vector $b\in\mathbb{R}^m$, we propose classical…

Data Structures and Algorithms · Computer Science 2023-12-01 Qian Zuo , Tongyang Li

Dense linear layers are the dominant computational bottleneck in foundation models. Identifying more efficient alternatives to dense matrices has enormous potential for building more compute-efficient models, as exemplified by the success…

Machine Learning · Computer Science 2024-06-11 Shikai Qiu , Andres Potapczynski , Marc Finzi , Micah Goldblum , Andrew Gordon Wilson

To exploit both memory locality and the full performance potential of highly tuned kernels, dense linear algebra libraries such as LAPACK commonly implement operations as blocked algorithms. However, to achieve next-to-optimal performance…

Mathematical Software · Computer Science 2022-04-08 Elmar Peise , Paolo Bientinesi

Enhancing classical machine learning (ML) algorithms through quantum kernels is a rapidly growing research topic in quantum machine learning (QML). A key challenge in using kernels -- both classical and quantum -- is that ML workflows…

Quantum Physics · Physics 2021-12-17 Annie Naveh , Imogen Fitzgerald , Anna Phan , Andrew Lockwood , Travis L. Scholten

With the rise of big data sets, the popularity of kernel methods declined and neural networks took over again. The main problem with kernel methods is that the kernel matrix grows quadratically with the number of data points. Most attempts…

Machine Learning · Computer Science 2016-09-15 Nikolaas Steenbergen , Sebastian Schelter , Felix Bießmann

Kernel method in machine learning consists of encoding input data into a vector in a Hilbert space called the feature space and modeling the target function as a linear map on the feature space. Given a cost function, computing such an…

Quantum Physics · Physics 2022-10-18 Salman Beigi

A combination of hierarchical tree-like data structures and data access patterns from fast multipole methods and hierarchical low-rank approximation of linear operators from H-matrix methods appears to form an algorithmic path forward for…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-06-10 Rio Yokota , George Turkiyyah , David Keyes

Quantum algorithms are a very promising field. However, creating and manipulating these kind of algorithms is a very complex task, specially for software engineers used to work at higher abstraction levels. The work presented here is part…

Previous studies have reported that common dense linear algebra operations do not achieve speed up by using multiple geographical sites of a computational grid. Because such operations are the building blocks of most scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-15 Emmanuel Agullo , Camille Coti , Jack Dongarra , Thomas Herault , Julien Langou

We study the two-dimensional hierarchical rectangle packing problem, motivated by applications in analog integrated circuit layout, facility layout, and logistics. Unlike classical strip or bin packing, the dimensions of the container are…

Computational Geometry · Computer Science 2025-12-24 Josef Grus , Zdeněk Hanzálek , Christian Artigues , Cyrille Briand , Emmanuel Hebrard

We consider integer and linear programming problems for which the linear constraints exhibit a (recursive) block-structure: The problem decomposes into independent and efficiently solvable sub-problems if a small number of constraints is…

Computational Complexity · Computer Science 2020-08-04 Jana Cslovjecsek , Friedrich Eisenbrand , Christoph Hunkenschröder , Lars Rohwedder , Robert Weismantel

We develop several efficient algorithms for the classical \emph{Matrix Scaling} problem, which is used in many diverse areas, from preconditioning linear systems to approximation of the permanent. On an input $n\times n$ matrix $A$, this…

Data Structures and Algorithms · Computer Science 2017-04-10 Zeyuan Allen-Zhu , Yuanzhi Li , Rafael Oliveira , Avi Wigderson

We present a parallel hierarchical solver for general sparse linear systems on distributed-memory machines. For large-scale problems, this fully algebraic algorithm is faster and more memory-efficient than sparse direct solvers because it…

Numerical Analysis · Mathematics 2017-12-21 Chao Chen , Hadi Pouransari , Sivasankaran Rajamanickam , Erik G. Boman , Eric Darve

In this paper, a hierarchical Tucker low-rank (HTLR) matrix is proposed to approximate non-oscillatory kernel functions in linear complexity. The HTLR matrix is based on the hierarchical matrix, with the low-rank blocks replaced by Tucker…

Numerical Analysis · Mathematics 2025-08-11 Yingzhou Li , Jingyu Liu

Learning linear combinations of multiple kernels is an appealing strategy when the right choice of features is unknown. Previous approaches to multiple kernel learning (MKL) promote sparse kernel combinations to support interpretability and…

Machine Learning · Computer Science 2010-10-28 Marius Kloft , Ulf Brefeld , Soeren Sonnenburg , Alexander Zien

The multiplication of matrices is an important arithmetic operation in computational mathematics. In the context of hierarchical matrices, this operation can be realized by the multiplication of structured block-wise low-rank matrices,…

Numerical Analysis · Mathematics 2018-05-24 Jürgen Dölz , Helmut Harbrecht , Michael D. Multerer
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