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Related papers: OMR-NPA: Optimized Matrix Representation of Nucleo…

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De novo assembly enables investigations of unknown genomes, paving the way for personalized medicine and disease management. However, it faces immense computational challenges arising from the excessive data volumes and algorithmic…

Hardware Architecture · Computer Science 2025-05-14 Heewoo Kim , Sanjay Sri Vallabh Singapuram , Haojie Ye , Joseph Izraelevitz , Trevor Mudge , Ronald Dreslinski , Nishil Talati

A series of relativistic one-boson-exchange potentials for two-nucleon system, denoted as OBEP$\Lambda$, is constructed with a momentum cutoff $\Lambda$ ranging from $\infty$ to 2 fm$^{-1}$. These potentials are developed by simultaneous…

Nuclear Theory · Physics 2023-12-07 Chencan Wang , Sibo Wang , Hui Tong , Jinniu Hu , Jiangming Yao

The recent progress of linear-scaling or O(N) methods in the density functional theory (DFT) is remarkable. We expect that first-principles molecular dynamics (FPMD) simulations based on DFT can now treat more realistic and complex systems…

Materials Science · Physics 2014-11-11 Michiaki Arita , David R. Bowler , Tsuyoshi Miyazaki

This paper presents a novel pre-trained language models (PLM) compression approach based on the matrix product operator (short as MPO) from quantum many-body physics. It can decompose an original matrix into central tensors (containing the…

Machine Learning · Computer Science 2021-06-07 Peiyu Liu , Ze-Feng Gao , Wayne Xin Zhao , Z. Y. Xie , Zhong-Yi Lu , Ji-Rong Wen

Neural Processes (NPs) are a rapidly evolving class of models designed to directly model the posterior predictive distribution of stochastic processes. Originally developed as a scalable alternative to Gaussian Processes (GPs), which are…

Machine Learning · Computer Science 2026-04-20 Daniel Jenson , Jhonathan Navott , Mengyan Zhang , Makkunda Sharma , Elizaveta Semenova , Seth Flaxman

While the matrix completion problem has attracted considerable attention over the decades, few works address the nonignorable missing issue and all have their limitations. In this article, we propose a nuclear norm regularized row- and…

Machine Learning · Statistics 2025-06-30 Yuanhong A , Guoyu Zhang , Yongcheng Zeng , Bo Zhang

The tensor-structured parametric analysis (TPA) has been recently developed for simulating and analysing stochastic behaviours of gene regulatory networks [Liao et. al., 2015]. The method employs the Fokker-Planck approximation of the…

Quantitative Methods · Quantitative Biology 2019-10-08 Shuohao Liao

Matrix-accelerated stencil computation is a hot research topic, yet its application to three-dimensional (3D) high-order stencils and HPC remains underexplored. With the emergence of matrix units on multicore CPUs, we analyze matrix-based…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-16 Yinuo Wang , Tianqi Mao , Lin Gan , Wubing Wan , Zeyu Song , Jiayu Fu , Lanke He , Wenqiang Wang , Zekun Yin , Wei Xue , Guangwen Yang

The accurate computation of non-linear optical properties (NLOPs) in large polymers requires accounting for electronic correlation effects with a reasonable computational cost. The Random Phase Approximation (RPA) used in the adiabatic…

In this paper, we study the problem of approximately computing the product of two real matrices. In particular, we analyze a dimensionality-reduction-based approximation algorithm due to Sarlos [1], introducing the notion of nuclear rank as…

Statistics Theory · Mathematics 2014-04-01 Anastasios Kyrillidis , Michail Vlachos , Anastasios Zouzias

We describe several algorithms for matrix completion and matrix approximation when only some of its entries are known. The approximation constraint can be any whose approximated solution is known for the full matrix. For low rank…

Numerical Analysis · Mathematics 2014-07-01 Gil Shabat , Yaniv Shmueli , Amir Averbuch

We study an assortment optimization problem under a multi-purchase choice model in which customers choose a bundle of up to one product from each of two product categories. Different bundles have different utilities and the bundle price is…

Data Structures and Algorithms · Computer Science 2022-10-12 Xin Chen , Jiachun Li , Menglong Li , Tiancheng Zhao , Yuan Zhou

The precise description of quantum nuclear fluctuations in atomistic modelling is possible by employing path integral techniques, which involve a considerable computational overhead due to the need of simulating multiple replicas of the…

Chemical Physics · Physics 2017-03-23 Venkat Kapil , Jörg Behler , Michele Ceriotti

Weighted low rank approximation (WLRA) is an important yet computationally challenging primitive with applications ranging from statistical analysis, model compression, and signal processing. To cope with the NP-hardness of this problem,…

Data Structures and Algorithms · Computer Science 2024-06-05 David P. Woodruff , Taisuke Yasuda

This paper studies the matrix completion problem under arbitrary sampling schemes. We propose a new estimator incorporating both max-norm and nuclear-norm regularization, based on which we can conduct efficient low-rank matrix recovery…

Machine Learning · Statistics 2016-09-27 Ethan X. Fang , Han Liu , Kim-Chuan Toh , Wen-Xin Zhou

Dataflow scheduling decisions are of vital importance to neural network (NN) accelerators. Recent scalable NN accelerators support a rich set of advanced dataflow techniques. The problems of comprehensively representing and quickly finding…

Hardware Architecture · Computer Science 2023-06-29 Zhiyao Li , Mingyu Gao

The advent of nucleon-nucleon potentials derived from chiral perturbation theory, as well as the so-called V-low-k approach to the renormalization of the strong short-range repulsion contained in the potentials, have brought renewed…

Nuclear Theory · Physics 2015-05-27 L. Coraggio , A. Covello , A. Gargano , N. Itaco , T. T. S. Kuo

We introduce a new paradigm for solving regularized variational problems. These are typically formulated to address ill-posed inverse problems encountered in signal and image processing. The objective function is traditionally defined by…

Optimization and Control · Mathematics 2021-04-22 Jean-Christophe Pesquet , Audrey Repetti , Matthieu Terris , Yves Wiaux

Matrix product state (MPS) offers a framework for encoding classical data into quantum states, enabling the efficient utilization of quantum resources for data representation and processing. This research paper investigates techniques to…

Quantum Physics · Physics 2025-02-26 Hyeongjun Jeon , Kyungmin Lee , Dongkyu Lee , Bongsang Kim , Taehyun Kim

We perform the calculation of nuclear matrix elements for the neutrinoless double beta decays under a Left-Right symmetric model mediated by light neutrino, and we adopt the spherical quasi-particle random-phase approximation (QRPA)…

Nuclear Theory · Physics 2025-06-17 Ri-Guang Huang , You-Cai Chen , Dong-Liang Fang