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Automatic rib labeling and anatomical centerline extraction are common prerequisites for various clinical applications. Prior studies either use in-house datasets that are inaccessible to communities, or focus on rib segmentation that…

Image and Video Processing · Electrical Eng. & Systems 2023-08-02 Liang Jin , Shixuan Gu , Donglai Wei , Jason Ken Adhinarta , Kaiming Kuang , Yongjie Jessica Zhang , Hanspeter Pfister , Bingbing Ni , Jiancheng Yang , Ming Li

Spatial transcriptomics (ST) enables the visualization of gene expression within the context of tissue morphology. This emerging discipline has the potential to serve as a foundation for developing tools to design precision medicines.…

Image and Video Processing · Electrical Eng. & Systems 2024-11-12 Shivam Kumar , Samrat Chatterjee

Computer-assisted minimally invasive surgery has great potential in benefiting modern operating theatres. The video data streamed from the endoscope provides rich information to support context-awareness for next-generation intelligent…

Computer Vision and Pattern Recognition · Computer Science 2022-08-04 Ziyi Wang , Bo Lu , Yonghao Long , Fangxun Zhong , Tak-Hong Cheung , Qi Dou , Yunhui Liu

Functional endoscopic sinus surgery (FESS) is a surgical procedure used to treat acute cases of sinusitis and other sinus diseases. FESS is fast becoming the preferred choice of treatment due to its minimally invasive nature. However, due…

Computer Vision and Pattern Recognition · Computer Science 2016-10-26 Seth D. Billings , Ayushi Sinha , Austin Reiter , Simon Leonard , Masaru Ishii , Gregory D. Hager , Russell H. Taylor

The Wireless Capsule Endoscopy (WCE) is becoming a popular way of screening gastrointestinal system diseases and cancer. However, the time-consuming process in inspecting WCE data limits its applications and increases the cost of…

Computer Vision and Pattern Recognition · Computer Science 2018-09-10 Xiaolu Zhang , Shiwan Zhao , Lingxi Xie

High-resolution imaging is crucial for enhancing visual clarity and enabling precise computer-assisted guidance in minimally invasive surgery (MIS). Despite the increasing adoption of 4K endoscopic systems, there remains a significant gap…

Gastrointestinal diseases impose a growing global health burden, and endoscopy is a primary tool for early diagnosis. However, routine endoscopic image interpretation still suffers from missed lesions and limited efficiency. Although…

Computer Vision and Pattern Recognition · Computer Science 2026-04-08 Peixi Peng , Housheng Xie , Yanling Wei , Guangcong Ruan , Xiaoyang Zou , Qian Cao , Yongjian Nian , Guoyan Zheng

Deep learning models have demonstrated remarkable success in multi-organ segmentation but typically require large-scale datasets with all organs of interest annotated. However, medical image datasets are often low in sample size and only…

Computer Vision and Pattern Recognition · Computer Science 2023-11-03 Han Liu , Zhoubing Xu , Riqiang Gao , Hao Li , Jianing Wang , Guillaume Chabin , Ipek Oguz , Sasa Grbic

Background and objective: Sharing of medical data is required to enable the cross-agency flow of healthcare information and construct high-accuracy computer-aided diagnosis systems. However, the large sizes of medical datasets, the massive…

Computer Vision and Pattern Recognition · Computer Science 2022-11-02 Guang Li , Ren Togo , Takahiro Ogawa , Miki Haseyama

The application of deep learning to medical image segmentation has been hampered due to the lack of abundant pixel-level annotated data. Few-shot Semantic Segmentation (FSS) is a promising strategy for breaking the deadlock. However, a…

Computer Vision and Pattern Recognition · Computer Science 2021-10-26 Xiaoang Shen , Guokai Zhang , Huilin Lai , Jihao Luo , Jianwei Lu , Ye Luo

To better understand scene images in the field of remote sensing, multi-label annotation of scene images is necessary. Moreover, to enhance the performance of deep learning models for dealing with semantic scene understanding tasks, it is…

Computer Vision and Pattern Recognition · Computer Science 2020-10-02 Xiaoman Qi , PanPan Zhu , Yuebin Wang , Liqiang Zhang , Junhuan Peng , Mengfan Wu , Jialong Chen , Xudong Zhao , Ning Zang , P. Takis Mathiopoulos

Background and Purpose: Colorectal cancer is a common fatal malignancy, the fourth most common cancer in men, and the third most common cancer in women worldwide. Timely detection of cancer in its early stages is essential for treating the…

Physicians use Capsule Endoscopy (CE) as a non-invasive and non-surgical procedure to examine the entire gastrointestinal (GI) tract for diseases and abnormalities. A single CE examination could last between 8 to 11 hours generating up to…

Computer Vision and Pattern Recognition · Computer Science 2021-10-19 Sodiq Adewole , Philip Fernandes , James Jablonski , Andrew Copland , Michael Porter , Sana Syed , Donald Brown

We present a large scale data set, OpenEDS: Open Eye Dataset, of eye-images captured using a virtual-reality (VR) head mounted display mounted with two synchronized eyefacing cameras at a frame rate of 200 Hz under controlled illumination.…

Computer Vision and Pattern Recognition · Computer Science 2019-05-20 Stephan J. Garbin , Yiru Shen , Immo Schuetz , Robert Cavin , Gregory Hughes , Sachin S. Talathi

Optical endoscopy plays a crucial role in minimally invasive medical diagnostics and therapeutic procedures. Nonetheless, state-of-the-art endoscopic zoom objectives are bulky, requiring multi-element lens actuation, which can limit…

Transformer-based models, capable of learning better global dependencies, have recently demonstrated exceptional representation learning capabilities in computer vision and medical image analysis. Transformer reformats the image into…

Recently deep learning has been witnessing widespread adoption in various medical image applications. However, training complex deep neural nets requires large-scale datasets labeled with ground truth, which are often unavailable in many…

Computer Vision and Pattern Recognition · Computer Science 2018-05-29 Wentao Zhu , Yeeleng S. Vang , Yufang Huang , Xiaohui Xie

The SCARED dataset is a widely used benchmark for endoscopic depth estimation, offering ground-truth 3D reconstructions captured with a structured light sensor. However, the depth maps for non-keyframe images rely on robot kinematics that…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 John J. Han , Adam Schmidt , Max Allan , Jie Ying Wu , Omid Mohareri

Automatic segmentation of lesions in FDG-18 Whole Body (WB) PET/CT scans using deep learning models is instrumental for determining treatment response, optimizing dosimetry, and advancing theranostic applications in oncology. However, the…

Image and Video Processing · Electrical Eng. & Systems 2023-11-06 Gowtham Krishnan Murugesan , Diana McCrumb , Eric Brunner , Jithendra Kumar , Rahul Soni , Vasily Grigorash , Stephen Moore , Jeff Van Oss

This paper attempts to provide the reader a place to begin studying the application of computer vision and machine learning to gastrointestinal (GI) endoscopy. They have been classified into 18 categories. It should be be noted by the…

Medical Physics · Physics 2019-05-01 Anant S. Vemuri