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Can language models read biomedical texts and explain the biomedical mechanisms discussed? In this work we introduce a biomedical mechanism summarization task. Biomedical studies often investigate the mechanisms behind how one entity (e.g.,…

Computation and Language · Computer Science 2023-01-13 Mohaddeseh Bastan , Nishant Shankar , Mihai Surdeanu , Niranjan Balasubramanian

Single document summarization generates summary by extracting the representative sentences from the document. In this paper, we presented a novel technique for summarization of domain-specific text from a single web document that uses…

Information Retrieval · Computer Science 2016-11-17 Rushdi Shams , M. M. A. Hashem , Afrina Hossain , Suraiya Rumana Akter , Monika Gope

Sentence summarization aims at compressing a long sentence into a short one that keeps the main gist, and has extensive real-world applications such as headline generation. In previous work, researchers have developed various approaches to…

Computation and Language · Computer Science 2022-10-18 Puyuan Liu , Xiang Zhang , Lili Mou

Curation of literature in life sciences is a growing challenge. The continued increase in the rate of publication, coupled with the relatively fixed number of curators worldwide presents a major challenge to developers of biomedical…

An emerging recipe for achieving state-of-the-art effectiveness in neural document re-ranking involves utilizing large pre-trained language models - e.g., BERT - to evaluate all individual passages in the document and then aggregating the…

Information Retrieval · Computer Science 2021-05-21 Sebastian Hofstätter , Bhaskar Mitra , Hamed Zamani , Nick Craswell , Allan Hanbury

Summarization datasets are often assembled either by scraping naturally occurring public-domain summaries -- which are nearly always in difficult-to-work-with technical domains -- or by using approximate heuristics to extract them from…

Computation and Language · Computer Science 2022-05-24 Alex Wang , Richard Yuanzhe Pang , Angelica Chen , Jason Phang , Samuel R. Bowman

Video transcript summarization is a fundamental task for video understanding. Conventional approaches for transcript summarization are usually built upon the summarization data for written language such as news articles, while the domain…

Computation and Language · Computer Science 2021-07-16 Tengchao Lv , Lei Cui , Momcilo Vasilijevic , Furu Wei

Existing summarization systems mostly generate summaries purely relying on the content of the source document. However, even for humans, we usually need some references or exemplars to help us fully understand the source document and write…

Computation and Language · Computer Science 2021-12-14 Chenxin An , Ming Zhong , Zhichao Geng , Jianqiang Yang , Xipeng Qiu

The limitations sections of scientific articles play a crucial role in highlighting the boundaries and shortcomings of research, thereby guiding future studies and improving research methods. Analyzing these limitations benefits…

Computation and Language · Computer Science 2025-03-17 Ibrahim Al Azhar , Venkata Devesh Reddy , Hamed Alhoori , Akhil Pandey Akella

Most existing text summarization datasets are compiled from the news domain, where summaries have a flattened discourse structure. In such datasets, summary-worthy content often appears in the beginning of input articles. Moreover, large…

Computation and Language · Computer Science 2019-06-11 Eva Sharma , Chen Li , Lu Wang

Current neural network-based methods to the problem of document summarisation struggle when applied to datasets containing large inputs. In this paper we propose a new approach to the challenge of content-selection when dealing with…

Computation and Language · Computer Science 2025-05-07 Maciej Zembrzuski , Saad Mahamood

In recent years, the trend of deploying digital systems in numerous industries has hiked. The health sector has observed an extensive adoption of digital systems and services that generate significant medical records. Electronic health…

Computation and Language · Computer Science 2022-03-01 Neel Kanwal , Giuseppe Rizzo

Citation texts are sometimes not very informative or in some cases inaccurate by themselves; they need the appropriate context from the referenced paper to reflect its exact contributions. To address this problem, we propose an unsupervised…

Computation and Language · Computer Science 2017-05-24 Arman Cohan , Nazli Goharian

We propose a general framework for topic-specific summarization of large text corpora, and illustrate how it can be used for analysis in two quite different contexts: an OSHA database of fatality and catastrophe reports (to facilitate…

Computation and Language · Computer Science 2016-07-26 Luke Miratrix , Robin Ackerman

Generating texts in scientific papers requires not only capturing the content contained within the given input but also frequently acquiring the external information called \textit{context}. We push forward the scientific text generation by…

Computation and Language · Computer Science 2021-10-22 Hong Chen , Hiroya Takamura , Hideki Nakayama

Named entity recognition identifies common classes of entities in text, but these entity labels are generally sparse, limiting utility to downstream tasks. In this work we present ScienceExamCER, a densely-labeled semantic classification…

Computation and Language · Computer Science 2019-11-26 Hannah Smith , Zeyu Zhang , John Culnan , Peter Jansen

The degree of success in document summarization processes depends on the performance of the method used in identifying significant sentences in the documents. The collection of unique words characterizes the major signature of the document,…

Information Retrieval · Computer Science 2012-05-09 Aji S , Ramachandra Kaimal

Large language models (LLMs) are capable of generating coherent summaries from very long contexts given a user query, and extracting and citing evidence spans helps improve the trustworthiness of these summaries. Whereas previous work has…

Computation and Language · Computer Science 2025-10-31 Dustin Wright , Zain Muhammad Mujahid , Lu Wang , Isabelle Augenstein , David Jurgens

This paper proposes a medical literature summary generation method based on the BERT model to address the challenges brought by the current explosion of medical information. By fine-tuning and optimizing the BERT model, we develop an…

Computation and Language · Computer Science 2024-10-29 Jiacheng Hu , Yiru Cang , Guiran Liu , Meiqi Wang , Weijie He , Runyuan Bao

We present a novel summarization framework for reviews of products and services by selecting informative and concise text segments from the reviews. Our method consists of two major steps. First, we identify five frequently occurring…

Information Retrieval · Computer Science 2012-11-26 Trung V. Nguyen , Alice H. Oh
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