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The normalized edit distance is one of the distances derived from the edit distance. It is useful in some applications because it takes into account the lengths of the two strings compared. The normalized edit distance is not defined in…

Neural and Evolutionary Computing · Computer Science 2013-12-09 Muhammad Marwan Muhammad Fuad

This short technical note presents a formal generalization of the Time Warp Edit Distance (TWED) proposed by Marteau (2009) to arbitrary metric spaces. By viewing both the observation and temporal domains as metric spaces $(X, d)$ and $(T,…

Information Retrieval · Computer Science 2026-01-12 Zhen Yi Lau

In this paper we offer a metric similar to graph edit distance which measures the distance between two (possibly infinite)weighted graphs with finite norm (we define the norm of a graph as the sum of absolute values of its edges). The main…

Metric Geometry · Mathematics 2009-06-16 Hamed Daneshpajouh , Hamid Reza Daneshpajouh , Farzad Didehvar

We consider the setting of Reeb graphs of piecewise linear functions and study distances between them that are stable, meaning that functions which are similar in the supremum norm ought to have similar Reeb graphs. We define an edit…

Algebraic Topology · Mathematics 2021-02-09 Ulrich Bauer , Claudia Landi , Facundo Memoli

In many robotics applications, it is necessary to compute not only the distance between the robot and the environment, but also its derivative - for example, when using control barrier functions. However, since the traditional Euclidean…

Several measures exist for string similarity, including notable ones like the edit distance and the indel distance. The former measures the count of insertions, deletions, and substitutions required to transform one string into another,…

Data Structures and Algorithms · Computer Science 2024-10-15 Sudatta Bhattacharya , Sanjana Dey , Elazar Goldenberg , Michal Koucký

Similarity search is an important problem in information retrieval. This similarity is based on a distance. Symbolic representation of time series has attracted many researchers recently, since it reduces the dimensionality of these high…

Information Retrieval · Computer Science 2010-06-18 Muhammad Marwan Muhammad Fuad , Pierre-François Marteau

In this paper we define a novel edit distance for merge trees, which we argue to be suitable for a good range of applications. Relying also on some technical results contained in other works, we investigate its stability properties, which…

Metric Geometry · Mathematics 2024-11-22 Matteo Pegoraro

Graph Edit Distance (GED) is defined as the minimum cost transformation of one graph into another and is a widely adopted metric for measuring the dissimilarity between graphs. The major problem of GED is that its computation is NP-hard,…

Machine Learning · Computer Science 2026-02-24 Francesco Leonardi , Markus Orsi , Jean-Louis Reymond , Kaspar Riesen

In this article, we propose tree edit distance with variables, which is an extension of the tree edit distance to handle trees with variables and has a potential application to measuring the similarity between mathematical formulas,…

Data Structures and Algorithms · Computer Science 2021-05-12 Tatsuya Akutsu , Tomoya Mori , Naotoshi Nakamura , Satoshi Kozawa , Yuhei Ueno , Thomas N. Sato

The edit distance is a basic string similarity measure used in many applications such as text mining, signal processing, bioinformatics, and so on. However, the computational cost can be a problem when we repeat many distance calculations…

Data Structures and Algorithms · Computer Science 2017-01-24 Hiroyuki Hanada , Mineichi Kudo , Atsuyoshi Nakamura

An edit distance is a metric between words that quantifies how two words differ by counting the number of edit operations needed to transform one word into the other one. A word f is said isometric with respect to an edit distance if, for…

Formal Languages and Automata Theory · Computer Science 2023-03-07 Marcella Anselmo , Giuseppa Castiglione , Manuela Flores , Dora Giammarresi , Maria Madonia , Sabrina Mantaci

In Pattern Matching with Weighted Edits (PMWED), we are given a pattern $P$ of length $m$, a text $T$ of length $n$, a positive threshold $k$, and oracle access to a weight function that specifies the costs of edits (depending on the…

Data Structures and Algorithms · Computer Science 2025-10-21 Panagiotis Charalampopoulos , Tomasz Kociumaka , Philip Wellnitz

Sequence comparison is a basic task to capture similarities and differences between two or more sequences of symbols, with countless applications such as in computational biology. An alignment is a way to compare sequences, where a giving…

Discrete Mathematics · Computer Science 2023-03-16 Eloi Araujo , Fábio V. Martinez , Carlos H. A. Higa , José Soares

A geometric graph is a combinatorial graph, endowed with a geometry that is inherited from its embedding in a Euclidean space. Formulation of a meaningful measure of (dis-)similarity in both the combinatorial and geometric structures of two…

Computational Geometry · Computer Science 2022-09-27 Sushovan Majhi , Carola Wenk

Mukherjee (Pattern Recognition Letters, vol. 32, pp. 824-831, 2011) recently introduced a class of distance functions called weighted t-cost distances that generalize m-neighbor, octagonal, and t-cost distances. He proved that weighted…

Numerical Analysis · Computer Science 2012-06-12 M. Emre Celebi , Hassan A. Kingravi , Fatih Celiker

The word mover's distance (WMD) is a fundamental technique for measuring the similarity of two documents. As the crux of WMD, it can take advantage of the underlying geometry of the word space by employing an optimal transport formulation.…

Machine Learning · Computer Science 2022-06-16 Ryoma Sato , Makoto Yamada , Hisashi Kashima

Edit distance, also known as Levenshtein distance, is an essential way to compare two strings that proved to be particularly useful in the analysis of genetic sequences and natural language processing. However, edit distance is a discrete…

Machine Learning · Computer Science 2019-04-30 Evgenii Ofitserov , Vasily Tsvetkov , Vadim Nazarov

Reeb graphs are structural descriptors that capture shape properties of a topological space from the perspective of a chosen function. In this work we define a combinatorial metric for Reeb graphs of orientable surfaces in terms of the cost…

Computational Geometry · Computer Science 2014-11-07 Barbara Di Fabio , Claudia Landi

We evaluate the dual cone of the set of diagonally dominant matrices (resp., scaled diagonally dominant matrices), namely ${\cal DD}_n^*$ (resp., ${\cal SDD}_n^*$), as an approximation of the semidefinite cone. We prove that the norm…

Optimization and Control · Mathematics 2022-07-19 Yuzhu Wang , Akiko Yoshise
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