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The evolution and emergence of antibiotic resistance is a major public health concern. The understanding of the within-host microbial dynamics combining mutational processes, horizontal gene transfer and resource consumption, is one of the…

Populations and Evolution · Quantitative Biology 2020-03-09 Ramsès Djidjou-Demasse , Samuel Alizon , Mircea T. Sofonea

We propose a model for diffusion-limited annihilation of two species, $A+B\to A$ or $B$, where the motion of the particles is subject to a drift. For equal initial concentrations of the two species, the density follows a power-law decay for…

Condensed Matter · Physics 2010-10-12 Daniel ben-Avraham , Vladimir Privman , Dexin Zhong

We discuss the criticality in the stochastic SIR model for infectious diseases. We adopt the path-integral formalism for the propagation of infections among susceptible, infectious, and removed individuals, and perform the perturbative and…

Populations and Evolution · Quantitative Biology 2022-02-14 Shigehiro Yasui , Yutaka Hatakeyama , Yoshiyasu Okuhara

The basic reproduction number ($R_0$) is a threshold parameter for disease extinction or survival in isolated populations. However no human population is fully isolated from other human or animal populations. We use compartmental models to…

Populations and Evolution · Quantitative Biology 2018-09-05 Angus McLure , Kathryn Glass

Understanding the asymptotic behavior of reaction-diffusion (RD) systems is crucial for modeling processes ranging from species coexistence in ecology to biochemical interactions within cells. In this work, we analyze RD systems in which…

Dynamical Systems · Mathematics 2025-02-18 Carlos Barajas , Jean-Jacques Slotine , Domitilla Del Vecchio

We present a mathematical study for the development of multiple sclerosis based on a reaction-diffusion system. The model describes interactions among different populations of human cells, motion of immune cells stimulated by cytokines,…

Tissues and Organs · Quantitative Biology 2026-01-07 Romina Travaglini

We study the extinction of epidemics in a simplicial susceptible-infected-susceptible model, where each susceptible individual becomes infected either by two-body interactions ($S+I \to 2I$) with a rate $\beta$ or by three-body interactions…

Statistical Mechanics · Physics 2024-01-26 Yingshan Guo , Chuansheng Shen , Hanshuang Chen

With a single circulating vector-borne virus, the basic reproduction number incorporates contributions from tick-to-tick (co-feeding), tick-to-host and host-to-tick transmission routes. With two different circulating vector-borne viral…

Climate change is intensifying infectious and chronic diseases like malaria and diabetes, respectively, especially among the vulnerable populations. Global temperatures have risen by approximately $0.6^\circ$C since 1950, extending the…

Multiagent Systems · Computer Science 2025-12-16 Shivank , Anurag Singh , Fakhteh Ghanbarnejad , Ajay K Sharma

We consider a dynamical system obtained by the random switching between $N$ Lotka-Volterra food chains. Our key assumption will be that at least two vector fields only differ on the resources allocated to the growth rate of the first…

Probability · Mathematics 2023-02-27 Antoine Bourquin

The paper is concerned with different types of dispersal chosen by competing species. We introduce a model with the diffusion-type term $\nabla \cdot \left[ a \nabla \left( u/P \right) \right]$ which includes some previously studied systems…

Dynamical Systems · Mathematics 2016-06-10 E. Braverman , Md. Kamrujjaman

In this letter, we investigate the population dynamics in a May-Leonard formulation of the rock-paper-scissors game in which one or two species, which we shall refer to as "weak", have a reduced predation or reproduction probability. We…

Populations and Evolution · Quantitative Biology 2021-08-11 P. P. Avelino , B. F. de Oliveira , R. S. Trintin

We study a large class of 1D reaction diffusion models with quenched disorder using a real space renormalization group method (RSRG) which yields exact results at large time. Particles (e.g. of several species) undergo diffusion with random…

Condensed Matter · Physics 2009-10-31 Pierre Le Doussal , Cecile Monthus

In this paper we analyse a class of nonlinear cross-diffusion systems for two species with local repulsive interactions that exhibit a formal gradient flow structure with respect to the Wasserstein metric. We show that systems where the…

Analysis of PDEs · Mathematics 2019-06-11 M. Burger , J. A. Carrillo , J. -F. Pietschmann , M. Schmidtchen

In this paper the Turing pattern formation mechanism of a two component reaction-diffusion system modeling the Schnakenberg chemical reaction coupled to linear cross-diffusion terms is studied. The linear cross-diffusion terms favors the…

Pattern Formation and Solitons · Physics 2017-05-08 G. Gambino , S. Lupo , M. Sammartino

RNA viruses exist in large intra-host populations which display great genotypic and phenotypic diversity. We analyze a model of viral competition between two different viral strains infecting a constantly replenished cell pool, in which we…

Populations and Evolution · Quantitative Biology 2011-01-18 Edgar Delgado-Eckert , Samuel Ojosnegros , Niko Beerenwinkel

Robustness of spatial pattern against perturbations is an indispensable property of developmental processes for organisms, which need to adapt to changing environments. Although specific mechanisms for this robustness have been extensively…

Adaptation and Self-Organizing Systems · Physics 2017-04-05 Tetsuhiro S. Hatakeyama , Kunihiko Kaneko

Competitive birth-death processes often exhibit an oscillatory behavior. We investigate a particular case where the oscillation cycles are marginally stable on the mean-field level. An iconic example of such a system is the Lotka-Volterra…

Populations and Evolution · Quantitative Biology 2015-05-13 Matthew Parker , Alex Kamenev

Since the last century, deterministic compartmental models have emerged as powerful tools to predict and control epidemic outbreaks, in many cases helping to mitigate their impacts. A key quantity for these models is the so-called Basic…

Populations and Evolution · Quantitative Biology 2022-11-03 Àlex Giménez-Romero , Rosa Flaquer-Galmés , Manuel A. Matias

The effects of demographic stochasticity in the long term behaviour of endemic infectious diseases have been considered for long as a necessary addition to an underlying deterministic theory. The latter would explain the regular behaviour…

Populations and Evolution · Quantitative Biology 2007-08-29 M. Simões , M. M. Telo da Gama , A. Nunes
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