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Metaphors are ubiquitous in human language. The metaphor detection task (MD) aims at detecting and interpreting metaphors from written language, which is crucial in natural language understanding (NLU) research. In this paper, we introduce…

Computation and Language · Computer Science 2021-07-29 Weicheng Ma , Ruibo Liu , Lili Wang , Soroush Vosoughi

Constructing click models and extracting implicit relevance feedback information from the interaction between users and search engines are very important to improve the ranking of search results. Using neural network to model users' click…

Information Retrieval · Computer Science 2023-02-01 Yingfei Wang , Jianping Liu , Jian Wang , Xiaofeng Wang , Meng Wang , Xintao Chu

Bacterial phase variation enables reversible, locus-specific phenotypic switching, often driven by DNA inversion (invertons). To identify these events, researchers commonly rely on sequencing reads that provide orientation-specific support.…

Genomics · Quantitative Biology 2026-03-18 Yi Lu , Jiaojiao Guan , Yang Shen , Jiayu Shang , Yanni Sun

The explosion in known microbial diversity in the last two decades has made it abundantly clear that microbes in the environment do not exist in isolation; they are members of communities. Accordingly, omics approaches such as metagenomics…

Quantitative Methods · Quantitative Biology 2024-07-15 James C. Kosmopoulos , Karthik Anantharaman

In this paper, we present Multi-scale Feature Aggregation Conformer (MFA-Conformer), an easy-to-implement, simple but effective backbone for automatic speaker verification based on the Convolution-augmented Transformer (Conformer). The…

Sound · Computer Science 2022-11-14 Yang Zhang , Zhiqiang Lv , Haibin Wu , Shanshan Zhang , Pengfei Hu , Zhiyong Wu , Hung-yi Lee , Helen Meng

The dissemination of fake news on social networks has drawn public need for effective and efficient fake news detection methods. Generally, fake news on social networks is multi-modal and has various connections with other entities such as…

Social and Information Networks · Computer Science 2022-05-09 Tianle Li , Yushi Sun , Shang-ling Hsu , Yanjia Li , Raymond Chi-Wing Wong

Phage display is a powerful laboratory technique used to study the interactions between proteins and other molecules, whether other proteins, peptides, DNA or RNA. The under-utilisation of this data in conjunction with deep learning models…

Populations and Evolution · Quantitative Biology 2026-01-08 Ilann Amiaud-Plachy , Michael Blank , Oliver Bent , Sebastien Boyer

Generating as diverse molecules as possible with desired properties is crucial for drug discovery research, which invokes many approaches based on deep generative models today. Despite recent advancements in these models, particularly in…

Machine Learning · Computer Science 2024-07-17 Changhun Lee , Gyumin Lee

Learning feature interaction is the critical backbone to building recommender systems. In web-scale applications, learning feature interaction is extremely challenging due to the sparse and large input feature space; meanwhile, manually…

Information Retrieval · Computer Science 2023-11-13 Huan Gui , Ruoxi Wang , Ke Yin , Long Jin , Maciej Kula , Taibai Xu , Lichan Hong , Ed H. Chi

In this article, we review recent machine learning methods used in challenging particle identification of heavy-boosted particles at high-energy colliders. Our primary focus is on attention-based Transformer networks. We report the…

High Energy Physics - Phenomenology · Physics 2024-11-19 A. Hammad , Mihoko M Nojiri

Metagenome, a mixture of different genomes (as a rule, bacterial), represents a pattern, and the analysis of its composition is, currently, one of the challenging problems of bioinformatics. In the present study, the possibility of…

Quantitative Methods · Quantitative Biology 2016-11-04 Valery Kirzhner , Zeev Volkovich , Renata Avros , Katerina Korenblat

Fine-Grained Visual Classification(FGVC) is the task that requires recognizing the objects belonging to multiple subordinate categories of a super-category. Recent state-of-the-art methods usually design sophisticated learning pipelines to…

Computer Vision and Pattern Recognition · Computer Science 2022-03-08 Qishuai Diao , Yi Jiang , Bin Wen , Jia Sun , Zehuan Yuan

Fungal Biosynthetic Gene Clusters (BGCs) of secondary metabolites are clusters of genes capable of producing natural products, compounds that play an important role in the production of a wide variety of bioactive compounds, including…

Genomics · Quantitative Biology 2020-03-31 Hayda Almeida , Adrian Tsang , Abdoulaye Baniré Diallo

Bacterial plant pathogens rely on a battalion of transcription factors to fine-tune their response to changing environmental conditions and marshal the genetic resources required for successful pathogenesis. Prediction of transcription…

Genomics · Quantitative Biology 2013-06-27 Surya Saha , Magdalen Lindeberg

Motivation: Viruses represent the most abundant biological entities on the planet and play vital roles in diverse ecosystems. Cataloging viruses across various environments is essential for understanding their properties and functions.…

Genomics · Quantitative Biology 2025-04-09 Cheng Peng , Jiayu Shang , Jiaojiao Guan , Yanni Sun

Human vision combines low-resolution "gist" information from the visual periphery with sparse but high-resolution information from fixated locations to construct a coherent understanding of a visual scene. In this paper, we introduce…

Computer Vision and Pattern Recognition · Computer Science 2026-02-25 Ritik Raina , Abe Leite , Alexandros Graikos , Seoyoung Ahn , Dimitris Samaras , Gregory J. Zelinsky

We propose a novel deep neural network architecture to learn interpretable representation for medical image analysis. Our architecture generates a global attention for region of interest, and then learns bag of words style deep feature…

Computer Vision and Pattern Recognition · Computer Science 2022-11-10 Soumen Basu , Mayank Gupta , Pratyaksha Rana , Pankaj Gupta , Chetan Arora

Nowadays advanced image editing tools and technical skills produce tampered images more realistically, which can easily evade image forensic systems and make authenticity verification of images more difficult. To tackle this challenging…

Computer Vision and Pattern Recognition · Computer Science 2021-08-10 Jing Hao , Zhixin Zhang , Shicai Yang , Di Xie , Shiliang Pu

The generalization of the Transformer architecture via MetaFormer has reshaped our understanding of its success in computer vision. By replacing self-attention with simpler token mixers, MetaFormer provides strong baselines for vision…

Computer Vision and Pattern Recognition · Computer Science 2026-04-27 Ron Keuth , Paul Kaftan , Mattias P. Heinrich

Recognizing geometric features on B-rep models is a cornerstone technique for multimedia content-based retrieval and has been widely applied in intelligent manufacturing. However, previous research often merely focused on Machining Feature…

Computer Vision and Pattern Recognition · Computer Science 2025-06-27 Yongkang Dai , Xiaoshui Huang , Yunpeng Bai , Hao Guo , Hongping Gan , Ling Yang , Yilei Shi
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