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A central challenge in topological data analysis is the interpretation of barcodes. The classical algebraic-topological approach to interpreting homology classes is to build maps to spaces whose homology carries semantics we understand and…

Algebraic Topology · Mathematics 2023-08-11 Iris H. R. Yoon , Robert Ghrist , Chad Giusti

It is well-known that the cohomology ring has a richer structure than homology groups. However, until recently, the use of cohomology in persistence setting has been limited to speeding up of barcode computations. Some of the recently…

Computational Geometry · Computer Science 2024-03-19 Tamal K. Dey , Abhishek Rathod

We study a family of invariants of compact metric spaces that combines the Curvature Sets defined by Gromov in the 1980s with Vietoris-Rips Persistent Homology. For given integers $k\geq 0$ and $n\geq 1$ we consider the dimension $k$…

Algebraic Topology · Mathematics 2023-07-26 Mario Gómez , Facundo Mémoli

This paper is a survey of persistent homology, primarily as it is used in topological data analysis. It includes the theory of persistence modules, as well as stability theorems for persistence barcodes, generalized persistence,…

Algebraic Topology · Mathematics 2020-04-03 Gunnar Carlsson

Assume that a finite set of points is randomly sampled from a subspace of a metric space. Recent advances in computational topology have provided several approaches to recovering the geometric and topological properties of the underlying…

Algebraic Topology · Mathematics 2021-01-29 Peter Bubenik , Peter T. Kim

We study distributions of persistent homology barcodes associated to taking subsamples of a fixed size from metric measure spaces. We show that such distributions provide robust invariants of metric measure spaces, and illustrate their use…

Computational Geometry · Computer Science 2014-01-20 Andrew J. Blumberg , Itamar Gal , Michael A. Mandell , Matthew Pancia

The persistent homology with coefficients in a field F coincides with the same for cohomology because of duality. We propose an implementation of a recently introduced algorithm for persistent cohomology that attaches annotation vectors…

Computational Geometry · Computer Science 2020-01-09 Jean-Daniel Boissonnat , Tamal K. Dey , Clément Maria

In this paper, we consider topological featurizations of data defined over simplicial complexes, like images and labeled graphs, obtained by convolving this data with various filters before computing persistence. Viewing a convolution…

Algebraic Topology · Mathematics 2024-01-26 Elchanan Solomon , Paul Bendich

Matrix reduction is the standard procedure for computing the persistent homology of a filtered simplicial complex with $m$ simplices. Its output is a particular decomposition of the total boundary matrix, from which the persistence diagrams…

Computational Geometry · Computer Science 2023-10-17 Matthew Piekenbrock , Jose A. Perea

Persistent homology has been devised as a promising tool for the topological simplification of complex data. However, it is computationally intractable for large data sets. In this work, we introduce multiresolution persistent homology for…

Biomolecules · Quantitative Biology 2015-04-02 Kelin Xia , Zhixiong Zhao , Guo-Wei Wei

Real-valued functions on geometric data -- such as node attributes on a graph -- can be optimized using descriptors from persistent homology, allowing the user to incorporate topological terms in the loss function. When optimizing a single…

Computational Geometry · Computer Science 2024-09-02 Luis Scoccola , Siddharth Setlur , David Loiseaux , Mathieu Carrière , Steve Oudot

Dimensionality reduction techniques are powerful tools for data preprocessing and visualization which typically come with few guarantees concerning the topological correctness of an embedding. The interleaving distance between the…

Machine Learning · Computer Science 2022-02-01 Bradley J. Nelson , Yuan Luo

We present a unified pipeline for univariate time series classification via complex networks and persistent homology. A time series is mapped to a graph through one of five constructions across three families (visibility (natural and…

Algebraic Topology · Mathematics 2026-05-05 İsmail Güzel

Random abstract simplicial complex representation provides a mathematical description of wireless networks and their topology. In order to reduce the energy consumption in this type of network, we intend to reduce the number of network…

Probability · Mathematics 2017-09-05 Anaïs Vergne , Laurent Decreusefond , Philippe Martins

The integral image, an intermediate image representation, has found extensive use in multi-scale local feature detection algorithms, such as Speeded-Up Robust Features (SURF), allowing fast computation of rectangular features at constant…

Computer Vision and Pattern Recognition · Computer Science 2015-10-20 Shoaib Ehsan , Adrian F. Clark , Naveed ur Rehman , Klaus D. McDonald-Maier

Topological data analysis can extract effective information from higher-dimensional data. Its mathematical basis is persistent homology. The persistent homology can calculate topological features at different spatiotemporal scales of the…

Algebraic Topology · Mathematics 2023-09-29 Dinghua Shi , Zhifeng Chen , Chuang Ma , Guanrong Chen

Persistent homology is a common technique in topological data analysis providing geometrical and topological information about the sample space. All this information, known as topological features, is summarized in persistence diagrams, and…

Methodology · Statistics 2022-04-05 Asael Fabian Martínez

The extension of persistent homology to multi-parameter setups is an algorithmic challenge. Since most computation tasks scale badly with the size of the input complex, an important pre-processing step consists of simplifying the input…

Algebraic Topology · Mathematics 2019-03-19 Ulderico Fugacci , Michael Kerber

Persistent homology is constrained to purely topological persistence while multiscale graphs account only for geometric information. This work introduces persistent spectral theory to create a unified low-dimensional multiscale paradigm for…

Combinatorics · Mathematics 2019-12-13 Rui Wang , Duc Duy Nguyen , Guo-Wei Wei

We introduce harmonic persistent homology spaces for filtrations of finite simplicial complexes. As a result we can associate concrete subspaces of cycles to each bar of the barcode of the filtration. We prove stability of the harmonic…

Algebraic Topology · Mathematics 2024-12-30 Saugata Basu , Nathanael Cox
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