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We suggest a mechanism based on spike time dependent plasticity (STDP) of synapses to store, retrieve and predict temporal sequences. The mechanism is demonstrated in a model system of simplified integrate-and-fire type neurons densely…

Adaptation and Self-Organizing Systems · Physics 2009-11-07 Thomas Nowotny , Misha I. Rabinovich , Henry D. I. Abarbanel

Spatio-temporal graph neural networks (STGNNs) are widely used for short-term forecasting in dynamic physical systems such as traffic and weather. However, the prevailing evaluation practice uses real world benchmark data sets in a single…

Machine Learning · Computer Science 2026-05-12 Henok Tenaw Moges , Charalampos Skokos , Deshendran Moodley

The numerical simulation of two-dimensional quantum many-body systems away from equilibrium constitutes a major challenge for all known computational methods. We investigate the utility of Tree Tensor Network (TTN) states to solve the…

Quantum Physics · Physics 2025-05-13 Wladislaw Krinitsin , Niklas Tausendpfund , Markus Heyl , Matteo Rizzi , Markus Schmitt

Estimation of the initial state of turbulent channel flow from limited data is investigated using an adjoint-variational approach. The data are generated from a reference direct numerical simulation (DNS) which is sub-sampled at different…

Fluid Dynamics · Physics 2021-07-01 Mengze Wang , Tamer A. Zaki

We present two algorithms by which a set of short, unbiased trajectories can be iteratively reweighted to obtain various observables. The first algorithm estimates the stationary (steady state) distribution of a system by iteratively…

Computational Physics · Physics 2020-06-18 John D. Russo , Jeremy Copperman , Daniel M. Zuckerman

Faster pathfinding in time-dependent transport networks is an important and challenging problem in navigation systems. There are two main types of transport networks: road networks for car driving and public transport route network. The…

Data Structures and Algorithms · Computer Science 2024-10-24 Andrii Rohovyi , Peter J. Stuckey , Toby Walsh

We develop and employ general Tree Tensor Networks (TTNs) to compute the vibrational spectra for two model systems: a set of 64-dimensional coupled oscillators and acetonitrile. We explore various tree architectures, ranging from the simple…

Chemical Physics · Physics 2025-12-19 Shuo Sun , Richard M. Milbradt , Stefan Knecht , Chandan Kumar , Christian B. Mendl

The cornerstone of time-dependent (TD) density functional theory (DFT), the Runge-Gross theorem, proves a one-to-one correspondence between TD potentials and TD densities of continuum Hamiltonians. In all practical implementations, however,…

Mesoscale and Nanoscale Physics · Physics 2015-05-20 S. Kurth , G. Stefanucci

This work proposes a novel neural network architecture, called the Dynamically Controlled Recurrent Neural Network (DCRNN), specifically designed to model dynamical systems that are governed by ordinary differential equations (ODEs). The…

Neural and Evolutionary Computing · Computer Science 2019-11-04 Yiwei Fu , Samer Saab , Asok Ray , Michael Hauser

Stochastic reaction network models arise in intracellular chemical reactions, epidemiological models and other population process models, and are a class of continuous time Markov chains which have the nonnegative integer lattice as state…

Numerical Analysis · Mathematics 2024-07-26 Muruhan Rathinam , Mingkai Yu

Continuous-time Bayesian networks (CTBNs) are graphical representations of multi-component continuous-time Markov processes as directed graphs. The edges in the network represent direct influences among components. The joint rate matrix of…

Artificial Intelligence · Computer Science 2012-07-02 Nir Friedman , Raz Kupferman

We study non-interacting Poissonian run-and-tumble particles (RTPs) in two dimensions whose velocity orientations are controlled by an arbitrary circular distribution $Q(\phi)$. RTP-type active transport has been reported to undergo…

Statistical Mechanics · Physics 2023-08-02 Yurim Jung

We live in a world increasingly dominated by networks -- communications, social, information, biological etc. A central attribute of many of these networks is that they are dynamic, that is, they exhibit structural changes over time. While…

Networking and Internet Architecture · Computer Science 2010-12-02 Prithwish Basu , Amotz Bar-Noy , Ram Ramanathan , Matthew P. Johnson

We investigate the computational power of the recently introduced class of isometric tensor network states (isoTNSs), which generalizes the isometric conditions of the canonical form of one-dimensional matrix-product states to tensor…

Strongly Correlated Electrons · Physics 2022-12-14 Sheng-Hsuan Lin , Michael Zaletel , Frank Pollmann

We investigate the non-equilibrium steady state of a one-dimensional (1D) lattice gas of dimers. The dynamics is described by a totally asymmetric exclusion process (TASEP) supplemented by attachment and detachment processes, mimicking…

Statistical Mechanics · Physics 2007-05-23 P. Pierobon , T. Franosch , E. Frey

Tensor network algorithms provide a suitable route for tackling real-time dependent problems in lattice gauge theories, enabling the investigation of out-of-equilibrium dynamics. We analyze a U(1) lattice gauge theory in (1+1) dimensions in…

Quantum Gases · Physics 2016-03-07 T. Pichler , M. Dalmonte , E. Rico , P. Zoller , S. Montangero

Time series data arising in many applications nowadays are high-dimensional. A large number of parameters describe features of these time series. We propose a novel approach to modeling a high-dimensional time series through several…

Methodology · Statistics 2024-08-22 Arkaprava Roy , Anindya Roy , Subhashis Ghosal

Graph models provide efficient tools to capture the underlying structure of data defined over networks. Many real-world network topologies are subject to change over time. Learning to model the dynamic interactions between entities in such…

Machine Learning · Computer Science 2025-01-03 Amirhossein Javaheri , Jiaxi Ying , Daniel P. Palomar , Farokh Marvasti

We introduce a change of perspective on tensor network states that is defined by the computational graph of the contraction of an amplitude. The resulting class of states, which we refer to as tensor network functions, inherit the…

Quantum Physics · Physics 2025-01-06 Wen-Yuan Liu , Si-Jing Du , Ruojing Peng , Johnnie Gray , Garnet Kin-Lic Chan

In the framework of time series analysis with recurrence networks, we introduce a self-adaptive method that determines the elusive recurrence threshold and identifies metastable states in complex real-world time series. As initial step, we…

Data Analysis, Statistics and Probability · Physics 2014-10-22 Iliusi Vega , Christof Schütte , Tim O. F. Conrad