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In this paper, we present a multiscale framework for solving the Helmholtz equation in heterogeneous media without scale separation and in the high frequency regime where the wavenumber $k$ can be large. The main innovation is that our…

Numerical Analysis · Mathematics 2022-10-21 Yifan Chen , Thomas Y. Hou , Yixuan Wang

In this work, we apply phase field simulations to examine the coarsening behavior of morphologically complex two-phase microstructures in which the phases have highly dissimilar mobilities, a condition approaching that found in experimental…

Materials Science · Physics 2022-06-10 W. Beck Andrews , Peter W. Voorhees , Katsuyo Thornton

In cardiac cells, structural organization is an important indicator of cell maturity and healthy function. Healthy cardiomyocytes exhibit well-aligned morphology with densely packed and organized sarcomeres. Immature or diseased…

Quantitative Methods · Quantitative Biology 2025-02-03 Saeed Mohammadzadeh , Emma Lejeune

We propose an algorithm for the computational homogenization of locally periodic hyperelastic structures undergoing large deformations due to external quasi-static loading. The algorithm performs clustering of macroscopic deformations into…

Numerical Analysis · Mathematics 2026-02-26 Vladimír Lukeš , Eduard Rohan

We perform one and two-parameter numerical bifurcation analysis of a mechanotransduction model approximating the dynamics of mesenchymal stem cell differentiation into neurons, adipocytes, myocytes and osteoblasts. For our analysis, we use…

Cell Behavior · Quantitative Biology 2023-03-16 Katiana Kontolati , Constantinos Siettos

A surface integral representation of Maxwell's equations allows the efficient electromagnetic (EM) modeling of three-dimensional structures with a two-dimensional discretization, via the boundary element method (BEM). However, existing BEM…

Numerical Analysis · Mathematics 2021-12-14 Shashwat Sharma , Piero Triverio

Background and Objective: This proof of concept study investigates mathematical modelling of blood flow and oxygen transport in cerebral microcirculation, focusing on understanding hemodynamic responses. By coupling oxygen transport models…

Numerical Analysis · Mathematics 2024-11-19 Maryam Samavaki , Santtu Söderholm , Arash Zarrin Nia , Sampsa Pursiainen

The diffusion of molecules in complex intracellular environments can be strongly influenced by spatial heterogeneity and stochasticity. A key challenge when modelling such processes using stochastic random walk frameworks is that negative…

Biological Physics · Physics 2019-01-31 Elliot J. Carr , Matthew J. Simpson

Various biological cells secrete diffusing chemical compounds into their environment for communication purposes. Secretion usually takes place over the cell membrane in a spatially heterogeneous manner. Mathematical models of these…

Numerical Analysis · Mathematics 2025-11-20 Qiyao Peng , Sander C. Hille

Cell plasma membranes display a dramatically rich structural complexity characterized by functional sub-wavelength domains with specific lipid and protein composition. Under favorable experimental conditions, patterned morphologies can also…

Soft Condensed Matter · Physics 2018-10-02 Nicolas Destainville , Manoel Manghi , Julie Cornet

This paper presents methodology for the computation of whole sets of heteroclinic connections between iso-energetic slices of center manifolds of center x center x saddle fixed points of autonomous Hamiltonian systems. It involves: (a)…

Dynamical Systems · Mathematics 2023-02-07 Miquel Barcelona , Alex Haro , Josep-Maria Mondelo

In this paper, we analyze the embedding cell method, an algorithm which has been developed for the numerical homogenization of metal-ceramic composite materials. We show the convergence of the iteration scheme of this algorithm and the…

Numerical Analysis · Mathematics 2016-12-20 Wolf-Patrick Düll , Bastian Hilder , Guido Schneider

Mathematical and computational models can assist in gaining an understanding of cell behavior at many levels of organization. Here, we review models in the literature that focus on eukaryotic cell motility at 3 size scales: intracellular…

Cell Behavior · Quantitative Biology 2021-01-27 Andreas Buttenschön , Leah Edelstein-Keshet

In this work we present the homogenization of a reaction-diffusion model that includes an evolving microstructure. Such type of problems model, for example, mineral dissolution and precipitation in a porous medium. Hence, we are dealing…

Analysis of PDEs · Mathematics 2022-05-09 Markus Gahn , Iuliu Sorin Pop

This paper is devoted to the homogenization of weakly coupled cooperative parabolic systems in strong convection regime with purely periodic coefficients. Our approach is to factor out oscillations from the solution via principal…

Analysis of PDEs · Mathematics 2014-11-20 Gregoire Allaire , Harsha Hutridurga

We investigate, both experimentally and theoretically, the bifurcation to alternans in heart tissue. Previously, this phenomenon has been modeled either as a smooth or as border-collision period-doubling bifurcation. Using a new…

Tissues and Organs · Quantitative Biology 2007-05-23 Carolyn M. Berger , Xiaopeng Zhao , David G. Schaeffer , Hana M. Dobrovolny , Wanda Krassowska , Daniel J. Gauthier

Liposomes that achieve a heterogeneous and spatially organized surface through phase separation have been recognized to be a promising platform for delivery purposes. However, their design and optimization through experimentation can be…

Soft Condensed Matter · Physics 2021-11-05 Y. Wang , Y. Palzhanov , A. Quaini , M. Olshanskii , S. Majd

Mathematical modeling of cardiac function can provide augmented simulation-based diagnosis tool for complementing and extending human understanding of cardiac diseases which represent the most common cause of worldwide death. As the…

Computational Engineering, Finance, and Science · Computer Science 2021-05-05 Chi Zhang , Jianhang Wang , Massoud Rezavand , Dong Wu , Xiangyu Hu

We consider an infinite spatial inhomogeneous random graph model with an integrable connection kernel that interpolates nicely between existing spatial random graph models. Key examples are versions of the weight-dependent random connection…

Probability · Mathematics 2023-06-21 Remco van der Hofstad , Pim van der Hoorn , Neeladri Maitra

The technique of periodic homogenization with two-scale convergence is applied to the analysis of a two-phase Stefan-type problem that arises in the study of a periodic array of melting ice bars. For this "reduced model" we prove results on…

Analysis of PDEs · Mathematics 2014-11-13 Isabell Graf , John M. Stockie
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