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Do current large language models (LLMs) better solve graph reasoning and generation tasks with parameter updates? In this paper, we propose InstructGraph, a framework that empowers LLMs with the abilities of graph reasoning and generation…

Computation and Language · Computer Science 2024-02-15 Jianing Wang , Junda Wu , Yupeng Hou , Yao Liu , Ming Gao , Julian McAuley

This paper investigates methods for improving generative data augmentation for deep learning. Generative data augmentation leverages the synthetic samples produced by generative models as an additional dataset for classification with small…

Machine Learning · Computer Science 2023-10-24 Shin'ya Yamaguchi , Daiki Chijiwa , Sekitoshi Kanai , Atsutoshi Kumagai , Hisashi Kashima

We consider the problem of data augmentation, i.e., generating artificial samples to extend a given corpus of training data. Specifically, we propose attributed-guided augmentation (AGA) which learns a mapping that allows to synthesize data…

Computer Vision and Pattern Recognition · Computer Science 2017-08-29 Mandar Dixit , Roland Kwitt , Marc Niethammer , Nuno Vasconcelos

We study self-supervised learning on graphs using contrastive methods. A general scheme of prior methods is to optimize two-view representations of input graphs. In many studies, a single graph-level representation is computed as one of the…

Machine Learning · Computer Science 2021-07-22 Xinyi Xu , Cheng Deng , Yaochen Xie , Shuiwang Ji

Entity alignment (EA) which links equivalent entities across different knowledge graphs (KGs) plays a crucial role in knowledge fusion. In recent years, graph neural networks (GNNs) have been successfully applied in many embedding-based EA…

Computation and Language · Computer Science 2023-05-01 Feng Xie , Xiang Zeng , Bin Zhou , Yusong Tan

Contrastive learning has become a key component of self-supervised learning approaches for graph-structured data. Despite their success, existing graph contrastive learning methods are incapable of uncertainty quantification for node…

Link prediction is one of the most fundamental tasks in graph mining, which motivates the recent studies of leveraging contrastive learning to enhance the performance. However, we observe two major weaknesses of these studies: i) the lack…

Machine Learning · Computer Science 2025-08-21 Chen-Hao Chang , Hui-Ju Hung , Chia-Hsun Lu , Chih-Ya Shen

Accurate and efficient prediction of the molecular properties of drugs is one of the fundamental problems in drug research and development. Recent advancements in representation learning have been shown to greatly improve the performance of…

Biomolecules · Quantitative Biology 2022-06-17 Hui Liu , Yibiao Huang , Xuejun Liu , Lei Deng

Data augmentation has been widely used to improve generalizability of machine learning models. However, comparatively little work studies data augmentation for graphs. This is largely due to the complex, non-Euclidean structure of graphs,…

Machine Learning · Computer Science 2020-12-03 Tong Zhao , Yozen Liu , Leonardo Neves , Oliver Woodford , Meng Jiang , Neil Shah

Heterogeneous Graphs (HGs) effectively model complex relationships in the real world through multi-type nodes and edges. In recent years, inspired by self-supervised learning (SSL), contrastive learning (CL)-based Heterogeneous Graphs…

Machine Learning · Computer Science 2025-05-06 Yu Wang , Lei Sang , Yi Zhang , Yiwen Zhang , Xindong Wu

Self-supervised learning on graphs can be bifurcated into contrastive and generative methods. Contrastive methods, also known as graph contrastive learning (GCL), have dominated graph self-supervised learning in the past few years, but the…

Machine Learning · Computer Science 2024-02-13 Liang Wang , Xiang Tao , Qiang Liu , Shu Wu , Liang Wang

Representation learning on text-attributed graphs (TAGs) integrates structural connectivity with rich textual semantics, enabling applications in diverse domains. Current methods largely rely on contrastive learning to maximize cross-modal…

Graphics · Computer Science 2025-10-15 Heng Zhang , Tianyi Zhang , Yuling Shi , Xiaodong Gu , Yaomin Shen , Zijian Zhang , Yilei Yuan , Hao Zhang , Jin Huang

Subgraph representation learning based on Graph Neural Network (GNN) has exhibited broad applications in scientific advancements, such as predictions of molecular structure-property relationships and collective cellular function. In…

Machine Learning · Computer Science 2022-10-17 Yili Shen , Xiao Liu , Cheng-Wei Ju , Jiaxu Yan , Jun Yi , Zhou Lin , Hui Guan

Recent analyses of self-supervised learning (SSL) find the following data-centric properties to be critical for learning good representations: invariance to task-irrelevant semantics, separability of classes in some latent space, and…

Machine Learning · Computer Science 2023-01-24 Puja Trivedi , Ekdeep Singh Lubana , Mark Heimann , Danai Koutra , Jayaraman J. Thiagarajan

The ability to incrementally learn new classes is vital to all real-world artificial intelligence systems. A large portion of high-impact applications like social media, recommendation systems, E-commerce platforms, etc. can be represented…

Machine Learning · Computer Science 2021-12-28 Zhen Tan , Kaize Ding , Ruocheng Guo , Huan Liu

Graph representation learning has attracted a surge of interest recently, whose target at learning discriminant embedding for each node in the graph. Most of these representation methods focus on supervised learning and heavily depend on…

Machine Learning · Computer Science 2021-07-07 Pengpeng Shao , Tong Liu , Dawei Zhang , Jianhua Tao , Feihu Che , Guohua Yang

Heterogeneous graphs can well describe the complex entity relationships in the real world. For example, online shopping networks contain multiple physical types of consumers and products, as well as multiple relationship types such as…

Machine Learning · Computer Science 2024-07-02 Jing Zhang , Xiaoqian Jiang , Yingjie Xie , Cangqi Zhou

Graph Retrieval-Augmented Generation (GRAG or Graph RAG) architectures aim to enhance language understanding and generation by leveraging external knowledge. However, effectively capturing and integrating the rich semantic information…

Computation and Language · Computer Science 2025-01-29 Karishma Thakrar

Contrastive learning has been widely applied to graph representation learning, where the view generators play a vital role in generating effective contrastive samples. Most of the existing contrastive learning methods employ pre-defined…

Machine Learning · Computer Science 2022-01-04 Yihang Yin , Qingzhong Wang , Siyu Huang , Haoyi Xiong , Xiang Zhang

Real world data is mostly unlabeled or only few instances are labeled. Manually labeling data is a very expensive and daunting task. This calls for unsupervised learning techniques that are powerful enough to achieve comparable results as…

Machine Learning · Computer Science 2021-05-21 Zekarias T. Kefato , Sarunas Girdzijauskas