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Anatomical consistency in biomarker segmentation is crucial for many medical image analysis tasks. A promising paradigm for achieving anatomically consistent segmentation via deep networks is incorporating pixel connectivity, a basic…

Image and Video Processing · Electrical Eng. & Systems 2023-04-04 Ziyun Yang , Sina Farsiu

We propose Geometric Neural Parametric Models (GNPM), a learned parametric model that takes into account the local structure of data to learn disentangled shape and pose latent spaces of 4D dynamics, using a geometric-aware architecture on…

Computer Vision and Pattern Recognition · Computer Science 2022-09-23 Mirgahney Mohamed , Lourdes Agapito

Statistical Shape Modeling (SSM) is a quantitative method for analyzing morphological variations in anatomical structures. These analyses often necessitate building models on targeted anatomical regions of interest to focus on specific…

Computer Vision and Pattern Recognition · Computer Science 2024-01-02 Hong Xu , Alan Morris , Shireen Y. Elhabian

We consider the problem of computing dense correspondences between non-rigid shapes with potentially significant partiality. Existing formulations tackle this problem through heavy manifold optimization in the spectral domain, given…

Computer Vision and Pattern Recognition · Computer Science 2023-03-28 Souhaib Attaiki , Gautam Pai , Maks Ovsjanikov

In this paper, we address the problem of learning 3D human pose and body shape from 2D image dataset, without having to use 3D dataset (body shape and pose). The idea is to use dense correspondences between image points and a body surface,…

Computer Vision and Pattern Recognition · Computer Science 2019-07-30 Yusuke Yoshiyasu , Lucas Gamez

Purpose: Semantic segmentation and landmark detection are fundamental tasks of medical image processing, facilitating further analysis of anatomical objects. Although deep learning-based pixel-wise classification has set a…

Computer Vision and Pattern Recognition · Computer Science 2024-12-17 Ron Keuth , Lasse Hansen , Maren Balks , Ronja Jäger , Anne-Nele Schröder , Ludger Tüshaus , Mattias Heinrich

Graph matching aims to establish correspondences between vertices of graphs such that both the node and edge attributes agree. Various learning-based methods were recently proposed for finding correspondences between image key points based…

Computer Vision and Pattern Recognition · Computer Science 2022-05-10 Zhenzhang Ye , Tarun Yenamandra , Florian Bernard , Daniel Cremers

Statistical shape modeling (SSM) is widely used in biology and medicine as a new generation of morphometric approaches for the quantitative analysis of anatomical shapes. Technological advancements of in vivo imaging have led to the…

This paper introduces Progressively Diffused Networks (PDNs) for unifying multi-scale context modeling with deep feature learning, by taking semantic image segmentation as an exemplar application. Prior neural networks, such as ResNet, tend…

Computer Vision and Pattern Recognition · Computer Science 2017-02-21 Ruimao Zhang , Wei Yang , Zhanglin Peng , Xiaogang Wang , Liang Lin

Deep networks for image classification often rely more on texture information than object shape. While efforts have been made to make deep-models shape-aware, it is often difficult to make such models simple, interpretable, or rooted in…

Computer Vision and Pattern Recognition · Computer Science 2023-05-24 Rajhans Singh , Ankita Shukla , Pavan Turaga

We cast shape matching as metric learning with convolutional networks. We break the end-to-end process of image representation into two parts. Firstly, well established efficient methods are chosen to turn the images into edge maps.…

Computer Vision and Pattern Recognition · Computer Science 2018-07-27 Filip Radenović , Giorgos Tolias , Ondřej Chum

Statistical Shape Models (SSMs) excel at identifying population level anatomical variations, which is at the core of various clinical and biomedical applications, including morphology-based diagnostics and surgical planning. However, the…

Computer Vision and Pattern Recognition · Computer Science 2025-03-28 Asma Khan , Tushar Kataria , Janmesh Ukey , Shireen Y. Elhabian

Statistical shape models enhance machine learning algorithms providing prior information about deformation. A Point Distribution Model (PDM) is a popular landmark-based statistical shape model for segmentation. It requires choosing a model…

Machine Learning · Computer Science 2018-08-02 Alma Eguizabal , Peter J. Schreier , David Ramírez

We consider the problem of establishing dense correspondences within a set of related shapes of strongly varying geometry. For such input, traditional shape matching approaches often produce unsatisfactory results. We propose an ensemble…

Graphics · Computer Science 2017-10-10 Oliver Burghard , Alexander Berner , Michael Wand , Niloy Mitra , Hans-Peter Seidel , Reinhard Klein

Decomposition of shapes into (approximate) convex parts is essential for applications such as part-based shape representation, shape matching, and collision detection. In this paper, we propose a novel convex decomposition using a…

Computer Vision and Pattern Recognition · Computer Science 2016-06-27 Fitsum Mesadi , Tolga Tasdizen

One of the data structures generated by medical imaging technology is high resolution point clouds representing anatomical surfaces. Raw images are in the form of triangulated surfaces and the first step is to create a standardised…

Methodology · Statistics 2017-01-26 Liberty Vittert , Adrian Bowman , Stanislav Katina

Statistical shape modeling (SSM) enables population-based quantitative analysis of anatomical shapes, informing clinical diagnosis. Deep learning approaches predict correspondence-based SSM directly from unsegmented 3D images but require…

Computer Vision and Pattern Recognition · Computer Science 2023-07-21 Jadie Adams , Shireen Elhabian

Species distribution models (SDMs) aim to predict the distribution of species by relating occurrence data with environmental variables. Recent applications of deep learning to SDMs have enabled new avenues, specifically the inclusion of…

Machine Learning · Computer Science 2024-11-07 Nina van Tiel , Robin Zbinden , Emanuele Dalsasso , Benjamin Kellenberger , Loïc Pellissier , Devis Tuia

We present a novel methodology that combines graph and dense segmentation techniques by jointly learning both point and pixel contour representations, thereby leveraging the benefits of each approach. This addresses deficiencies in typical…

Computer Vision and Pattern Recognition · Computer Science 2024-02-20 Kit Mills Bransby , Greg Slabaugh , Christos Bourantas , Qianni Zhang

Parametric 3D models have enabled a wide variety of tasks in computer graphics and vision, such as modeling human bodies, faces, and hands. However, the construction of these parametric models is often tedious, as it requires heavy manual…

Computer Vision and Pattern Recognition · Computer Science 2021-08-06 Pablo Palafox , Aljaž Božič , Justus Thies , Matthias Nießner , Angela Dai