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Background: Short-read aligners have recently gained a lot of speed by exploiting the massive parallelism of GPU. An uprising alternative to GPU is Intel MIC; supercomputers like Tianhe-2, currently top of TOP500, is built with 48,000 MIC…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-02-21 Sze-Hang Chan , Jeanno Cheung , Edward Wu , Heng Wang , Chi-Man Liu , Xiaoqian Zhu , Shaoliang Peng , Ruibang Luo , Tak-Wah Lam

Domain specific accelerators present new challenges and opportunities for code generation onto novel instruction sets, communication fabrics, and memory architectures. In this paper we introduce an intermediate representation (IR) which…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-24 Matthew Sotoudeh , Anand Venkat , Michael Anderson , Evangelos Georganas , Alexander Heinecke , Jason Knight

Linear principal component analysis (PCA) learns (semi-)orthogonal transformations by orienting the axes to maximize variance. Consequently, it can only identify orthogonal axes whose variances are clearly distinct, but it cannot identify…

Machine Learning · Computer Science 2024-07-02 Fahdi Kanavati , Lucy Katsnith , Masayuki Tsuneki

We propose AIDA, an inference engine for accelerating fully-connected (FC) layers of Deep Neural Network (DNN). AIDA is an associative in-memory processor, where the bulk of data never leaves the confines of the memory arrays, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-01-16 Leonid Yavits , Roman Kaplan , Ran Ginosar

Nonlinear independent component analysis (ICA) aims to uncover the true latent sources from their observable nonlinear mixtures. Despite its significance, the identifiability of nonlinear ICA is known to be impossible without additional…

Machine Learning · Computer Science 2023-11-03 Yujia Zheng , Kun Zhang

Recent research has revealed an ever-growing class of microarchitectural attacks that exploit speculative execution, a standard feature in modern processors. Proposed and deployed countermeasures involve a variety of compiler updates,…

Cryptography and Security · Computer Science 2022-08-17 Jan Philipp Thoma , Jakob Feldtkeller , Markus Krausz , Tim Güneysu , Daniel J. Bernstein

For a linear system, the response to a stimulus is often superposed by its responses to other decomposed stimuli. In quantum mechanics, a state is the superposition of multiple eigenstates. Here, by taking advantage of the phase difference,…

Machine Learning · Computer Science 2020-04-06 Chen Miao , Shaohua Ma

We present exa-AMD, an open-source, high-performance framework designed for accelerated materials discovery on modern supercomputers. exa-AMD overcomes key computational bottlenecks in large-scale structure prediction through task-based…

Materials Science · Physics 2025-12-11 Weiyi Xia , Maxim Moraru , Ying Wai Li , Cai-Zhuang Wang

Movable antenna (MA) has shown significant potential for improving the performance of integrated sensing and communication (ISAC) systems. In this paper, we model an MA-aided ISAC system operating in a communication full-duplex mono-static…

Information Theory · Computer Science 2025-05-22 Size Peng , Yin Xu , Guanli Yi , Cixiao Zhang , Dazhi He , Wenjun Zhang

Principal Component Analysis (PCA) has been widely used for dimensionality reduction and feature extraction. Robust PCA (RPCA), under different robust distance metrics, such as l1-norm and l2, p-norm, can deal with noise or outliers to some…

Machine Learning · Computer Science 2021-06-29 Zhao Kang , Hongfei Liu , Jiangxin Li , Xiaofeng Zhu , Ling Tian

Motivated by the previously developed multilevel aggregation method for solving structural analysis problems a novel two-level aggregation approach for efficient iterative solution of Principal Component Analysis (PCA) problems is proposed.…

Numerical Analysis · Computer Science 2016-03-01 Vitaly Bulgakov

Principal component analysis (PCA) is a widespread technique for data analysis that relies on the covariance-correlation matrix of the analyzed data. However to properly work with high-dimensional data, PCA poses severe mathematical…

Quantitative Methods · Quantitative Biology 2018-10-18 Luigi Leonardo Palese

Principal Component Analysis (PCA)-based techniques can separate data into different uncorrelated components and facilitate the statistical analysis as a pre-processing step. Independent Component Analysis (ICA) can separate statistically…

Instrumentation and Methods for Astrophysics · Physics 2023-01-03 Güray Hatipoğlu

We address the convolutive blind source separation problem for the (over-)determined case where (i) the number of nonstationary target-sources $K$ is less than that of microphones $M$, and (ii) there are up to $M - K$ stationary Gaussian…

Audio and Speech Processing · Electrical Eng. & Systems 2022-06-20 Rintaro Ikeshita , Tomohiro Nakatani , Shoko Araki

With the emerging big data applications of Machine Learning, Speech Recognition, Artificial Intelligence, and DNA Sequencing in recent years, computer architecture research communities are facing the explosive scale of various data…

Hardware Architecture · Computer Science 2017-12-14 Chao Wang , Wenqi Lou , Lei Gong , Lihui Jin , Luchao Tan , Yahui Hu , Xi Li , Xuehai Zhou

Independent Vector Analysis (IVA) is a popular extension of Independent Component Analysis (ICA) for joint separation of a set of instantaneous linear mixtures, with a direct application in frequency-domain speaker separation or extraction.…

Audio and Speech Processing · Electrical Eng. & Systems 2023-04-05 Zbyněk Koldovský , Jaroslav Čmejla , Tülay Adalı , Stephen O'Regan

Robust principal component analysis (RPCA) is a widely used tool for dimension reduction. In this work, we propose a novel non-convex algorithm, coined Iterated Robust CUR (IRCUR), for solving RPCA problems, which dramatically improves the…

Machine Learning · Statistics 2021-02-09 HanQin Cai , Keaton Hamm , Longxiu Huang , Jiaqi Li , Tao Wang

Principal component analysis (PCA) is largely adopted for chemical process monitoring and numerous PCA-based systems have been developed to solve various fault detection and diagnosis problems. Since PCA-based methods assume that the…

Machine Learning · Computer Science 2017-12-13 Haitao Zhao

Principal component analysis (PCA) is a classical dimension reduction method which projects data onto the principal subspace spanned by the leading eigenvectors of the covariance matrix. However, it behaves poorly when the number of…

Statistics Theory · Mathematics 2013-05-27 Zongming Ma

Independent Vector Analysis (IVA) is an effective approach for Blind Source Separation (BSS) of convolutive mixtures of audio signals. As a practical realization of an IVA-based BSS algorithm, the so-called AuxIVA update rules based on the…

Audio and Speech Processing · Electrical Eng. & Systems 2020-09-22 Andreas Brendel , Walter Kellermann