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We advance the state of the art in biomolecular interaction extraction with three contributions: (i) We show that deep, Abstract Meaning Representations (AMR) significantly improve the accuracy of a biomolecular interaction extraction…

Document-level relation extraction (DocRE) involves identifying relations between entities distributed in multiple sentences within a document. Existing methods focus on building a heterogeneous document graph to model the internal…

Due to the prosperity of Artificial Intelligence (AI) techniques, more and more backdoors are designed by adversaries to attack Deep Neural Networks (DNNs).Although the state-of-the-art method Neural Attention Distillation (NAD) can…

Named Entity Recognition and Disambiguation (NERD) systems have recently been widely researched to deal with the significant growth of the Web. NERD systems are crucial for several Natural Language Processing (NLP) tasks such as…

The digitalization of stored information in hospitals now allows for the exploitation of medical data in text format, as electronic health records (EHRs), initially gathered for other purposes than epidemiology. Manual search and analysis…

The electronic healthcare databases are starting to become more readily available and are thought to have excellent potential for generating adverse drug reaction signals. The Health Improvement Network (THIN) database is an electronic…

Aggressive language detection (ALD), detecting the abusive and offensive language in texts, is one of the crucial applications in NLP community. Most existing works treat ALD as regular classification with neural models, while ignoring the…

Deep Neural Networks (DNNs) have been successful in solving real-world tasks in domains such as connected and automated vehicles, disease, and job hiring. However, their implications are far-reaching in critical application areas. Hence,…

In rural regions of several developing countries, access to quality healthcare, medical infrastructure, and professional diagnosis is largely unavailable. Many of these regions are gradually gaining access to internet infrastructure,…

Drug overdose remains a critical global health issue, often driven by misuse of opioids, painkillers, and psychiatric medications. Traditional research methods face limitations, whereas social media offers real-time insights into…

In modern electronic medical records (EMR) much of the clinically important data - signs and symptoms, symptom severity, disease status, etc. - are not provided in structured data fields, but rather are encoded in clinician generated…

Named-entity recognition (NER) is fundamental to extracting structured information from the >80% of healthcare data that resides in unstructured clinical notes and biomedical literature. Despite recent advances with large language models,…

In the rapidly evolving field of healthcare and beyond, the integration of generative AI in Electronic Health Records (EHRs) represents a pivotal advancement, addressing a critical gap in current information extraction techniques. This…

As data and knowledge expand rapidly, adopting systematic methodologies for ontology generation has become crucial. With the daily increases in data volumes and frequent content changes, the demand for databases to store and retrieve…

Despite the success of end-to-end automatic speech recognition (ASR) models, challenges persist in recognizing rare, out-of-vocabulary words - including named entities (NE) - and in adapting to new domains using only text data. This work…

Alzheimer's disease (AD) is the fifth-leading cause of death among Americans aged 65 and older. Screening and early detection of AD and related dementias (ADRD) are critical for timely intervention and for identifying clinical trial…

Data-mining techniques have frequently been developed for Spontaneous reporting databases. These techniques aim to find adverse drug events accurately and efficiently. Spontaneous reporting databases are prone to missing information, under…

Combination therapies have become the standard of care for diseases such as cancer, tuberculosis, malaria and HIV. However, the combinatorial set of available multi-drug treatments creates a challenge in identifying effective combination…

We propose a novel mechanism for real-time (human-in-the-loop) feedback focused on false positive reduction to enhance anomaly detection models. It was designed for the lightweight deployment of a behavioral network anomaly detection model.…

Adverse event (AE) extraction following COVID-19 vaccines from text data is crucial for monitoring and analyzing the safety profiles of immunizations. Traditional deep learning models are adept at learning intricate feature representations…