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When analyzing the spread of viruses, epidemiologists often need to identify the location of infected hosts. This information can be found in public databases, such as GenBank, however, information provided in these databases are usually…

Computation and Language · Computer Science 2019-04-30 MohammadReza Davari , Leila Kosseim , Tien D. Bui

Avian Influenza breakouts cause millions of dollars in damage each year globally, especially in Asian countries such as China and South Korea. The impact magnitude of a breakout directly correlates to time required to fully understand the…

Quantitative Methods · Quantitative Biology 2018-02-27 Woo Yong Choi , Kyu Ye Song , Chan Woo Lee

Within the human respiratory tract (HRT), viruses diffuse through the periciliary fluid (PCF) bathing the epithelium, and travel upwards via advection towards the nose and mouth, as the mucus escalator entrains the PCF. While many…

Cell Behavior · Quantitative Biology 2020-04-15 Christian Quirouette , Nada P. Younis , Micaela B. Reddy , Catherine A. A. Beauchemin

In many modern day systems such as information extraction and knowledge management agents, ontologies play a vital role in maintaining the concept hierarchies of the selected domain. However, ontology population has become a problematic…

Computation and Language · Computer Science 2019-06-07 Vindula Jayawardana , Dimuthu Lakmal , Nisansa de Silva , Amal Shehan Perera , Keet Sugathadasa , Buddhi Ayesha , Madhavi Perera

Given multiple source word embeddings learnt using diverse algorithms and lexical resources, meta word embedding learning methods attempt to learn more accurate and wide-coverage word embeddings. Prior work on meta-embedding has repeatedly…

Computation and Language · Computer Science 2022-04-27 Danushka Bollegala

Word embeddings are a popular way to improve downstream performances in contemporary language modeling. However, the underlying geometric structure of the embedding space is not well understood. We present a series of explorations using…

Computation and Language · Computer Science 2020-09-17 Hongwei , Zhou , Oskar Elek , Pranav Anand , Angus G. Forbes

Malware detection is a critical aspect of information security. One difficulty that arises is that malware often evolves over time. To maintain effective malware detection, it is necessary to determine when malware evolution has occurred so…

Cryptography and Security · Computer Science 2021-03-11 Sunhera Paul , Mark Stamp

A model based on a thermodynamic approach is proposed for predicting the dynamics of communicable epidemics in a city, when the epidemic is governed by controlling efforts of multiple scales so that an entropy is associated with the system.…

Medical Physics · Physics 2013-10-01 W. B. Wang , Z. N. Wu , Z. M. Cao , R. F. Hu

Timely and robust influenza incidence forecasting is critical for public health decision-making. This paper presents MAESTRO (Multi-modal Adaptive Estimation for Temporal Respiratory Disease Outbreak), a novel, unified framework that…

Machine Learning · Computer Science 2025-09-22 Hong Liu , Kerui Cen , Yanxing Chen , Zige Liu , Dong Chen , Zifeng Yang , Chitin Hon

In the text processing context, most ML models are built on word embeddings. These embeddings are themselves trained on some datasets, potentially containing sensitive data. In some cases this training is done independently, in other cases,…

Computation and Language · Computer Science 2021-06-23 Saeed Mahloujifar , Huseyin A. Inan , Melissa Chase , Esha Ghosh , Marcello Hasegawa

Word embedding is a fundamental natural language processing task which can learn feature of words. However, most word embedding methods assign only one vector to a word, even if polysemous words have multi-senses. To address this…

Computation and Language · Computer Science 2022-06-30 Yangxi Zhou , Junping Du , Zhe Xue , Ang Li , Zeli Guan

The estimation from available data of parameters governing epidemics is a major challenge. In addition to usual issues (data often incomplete and noisy), epidemics of the same nature may be observed in several places or over different…

Methodology · Statistics 2021-09-20 Romain Narci , Maud Delattre , Catherine Larédo , Elisabeta Vergu

The enormous amount of data being generated on the web and social media has increased the demand for detecting online hate speech. Detecting hate speech will reduce their negative impact and influence on others. A lot of effort in the…

Computation and Language · Computer Science 2021-11-03 Hind Saleh , Areej Alhothali , Kawthar Moria

Neural word representations have proven useful in Natural Language Processing (NLP) tasks due to their ability to efficiently model complex semantic and syntactic word relationships. However, most techniques model only one representation…

Computation and Language · Computer Science 2015-11-23 Andrew Trask , Phil Michalak , John Liu

Viruses are submicroscopic agents that can infect all kinds of lifeforms and use their hosts' living cells to replicate themselves. Despite having some of the simplest genetic structures among all living beings, viruses are highly…

Computer Vision and Pattern Recognition · Computer Science 2024-05-27 Niloy Sikder , Md. Al-Masrur Khan , Anupam Kumar Bairagi , Mehedi Masud , Jun Jiat Tiang , Abdullah-Al Nahid

Predicting the potential success of a book in advance is vital in many applications. This could help both publishers and readers in their decision-making process whether or not a book is worth publishing and reading, respectively. In this…

Computation and Language · Computer Science 2021-10-06 Muhammad Khalifa , Aminul Islam

The lack of epidemiological data in wireless sensor networks (WSNs) is a fundamental difficulty in constructing robust models to forecast and mitigate threats such as viruses and worms. Many studies have examined different epidemic models…

Machine Learning · Computer Science 2025-11-21 Chukwunonso Henry Nwokoye , Blessing Oluchi , Sharna Waldron , Peace Ezzeh

Infectious diseases are one of the leading causes of morbidity and mortality around the world; thus, forecasting their impact is crucial for planning an effective response strategy. According to the Centers for Disease Control and…

Populations and Evolution · Quantitative Biology 2015-05-18 Kyle S. Hickmann , Geoffrey Fairchild , Reid Priedhorsky , Nicholas Generous , James M. Hyman , Alina Deshpande , Sara Y. Del Valle

We develop a multiple compartment Susceptible-Infected-Recovered (SIR) model to analyze the spread of several infectious diseases through different geographic areas. Additionally, we propose a data-quality sensitive optimization framework…

Populations and Evolution · Quantitative Biology 2019-06-21 Inbar Seroussi , Nir Levy , Daniela Paolotti , Nir Sochen , Elad Yom-Tov

Word embeddings have gained significant attention as learnable representations of semantic relations between words, and have been shown to improve upon the results of traditional word representations. However, little effort has been devoted…

Information Retrieval · Computer Science 2019-05-23 Gloria Feher , Andreas Spitz , Michael Gertz