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Fluorescence microscopes can record the dynamics of living cells with high spatio-temporal resolution in a single plane. However, monitoring rapid and dim fluorescence fluctuations, e.g induced by neuronal activity in the brain, remains…

In this paper, a compressive sensing (CS) approach is proposed for sparse binary signals' compression and reconstruction based on analog fountain codes (AFCs). In the proposed scheme, referred to as the analog fountain compressive sensing…

Information Theory · Computer Science 2018-07-13 Mahyar Shirvanimoghaddam , Yonghui Li , Branka Vucetic , Jinhong Yuan

Recent years, compressive sensing (CS) has improved greatly for the application of deep learning technology. For convenience, the input image is usually measured and reconstructed block by block. This usually causes block effect in…

Computer Vision and Pattern Recognition · Computer Science 2018-02-02 Xuemei Xie , Chenye Wang , Jiang Du , Guangming Shi

Compressed Sensing (CS) takes advantage of signal sparsity or compressibility and allows superb signal reconstruction from relatively few measurements. Based on CS theory, a suitable dictionary for sparse representation of the signal is…

Computer Vision and Pattern Recognition · Computer Science 2014-02-04 Jian Cheng , Tianzi Jiang , Rachid Deriche , Dinggang Shen , Pew-Thian Yap

The compressed sensing (CS) theory has been successfully applied to image compression in the past few years as most image signals are sparse in a certain domain. Several CS reconstruction models have been recently proposed and obtained…

Computer Vision and Pattern Recognition · Computer Science 2017-07-25 Wuzhen Shi , Feng Jiang , Shengping Zhang , Debin Zhao

Volumetric imaging by fluorescence microscopy is often limited by anisotropic spatial resolution from inferior axial resolution compared to the lateral resolution. To address this problem, here we present a deep-learning-enabled…

Computer Vision and Pattern Recognition · Computer Science 2022-07-06 Hyoungjun Park , Myeongsu Na , Bumju Kim , Soohyun Park , Ki Hean Kim , Sunghoe Chang , Jong Chul Ye

Analysis and visualization of 3D microscopy images pose challenges due to anisotropic axial resolution, demanding volumetric super-resolution along the axial direction. While training a learning-based 3D super-resolution model seems to be a…

Image and Video Processing · Electrical Eng. & Systems 2024-08-19 Kyungryun Lee , Won-Ki Jeong

Presented is a novel way to combine snapshot compressive imaging and lateral shearing interferometry in order to capture the spatio-spectral phase of an ultrashort laser pulse in a single shot. A deep unrolling algorithm is utilised for the…

The theory of compressed sensing (CS) has been successfully applied to image compression in the past few years, whose traditional iterative reconstruction algorithm is time-consuming. However, it has been reported deep learning-based CS…

Image and Video Processing · Electrical Eng. & Systems 2018-04-10 Yahan Wang , Huihui Bai , Lijun Zhao , Yao Zhao

Analysis of three-dimensional biological samples is critical to understanding tissue function and the mechanisms of disease. Many chronic conditions, like neurodegenerative diseases and cancers, correlate with complex tissue changes that…

Biological Physics · Physics 2019-11-06 Jiaming Guo , Camille Artur , Jason L. Eriksen , David Mayerich

We investigate the problem of 3D complex field reconstruction corresponding to unstained red blood cells (RBCs) with a single defocused off-axis digital hologram. We employ recently introduced mean gradient descent (MGD) optimization…

Image and Video Processing · Electrical Eng. & Systems 2023-03-22 Sunaina Rajora , Mansi Butola , Kedar Khare

Compressed sensing MRI is a classic inverse problem in the field of computational imaging, accelerating the MR imaging by measuring less k-space data. The deep neural network models provide the stronger representation ability and faster…

Computer Vision and Pattern Recognition · Computer Science 2018-04-05 Zhiwen Fan , Liyan Sun , Xinghao Ding , Yue Huang , Congbo Cai , John Paisley

Advances in fluorescence microscopy enable acquisition of 3D image volumes with better image quality and deeper penetration into tissue. Segmentation is a required step to characterize and analyze biological structures in the images and…

Computer Vision and Pattern Recognition · Computer Science 2019-04-16 Chichen Fu , Soonam Lee , David Joon Ho , Shuo Han , Paul Salama , Kenneth W. Dunn , Edward J. Delp

Despite recent advances, high performance single-shot 3D microscopy remains an elusive task. By introducing designed diffractive optical elements (DOEs), one is capable of converting a microscope into a 3D "kaleidoscope", in which case the…

Respiratory motion can cause strong blurring artifacts in the reconstructed image during MR acquisition. These artifacts become more prominent when use in the presence of undersampled data. Recently, compressed sensing (CS) is developed as…

Image and Video Processing · Electrical Eng. & Systems 2019-04-10 Abdul Haseeb Ahmed , Ijaz M. Qureshi , Jawad Ali Shah , Hammad Omer

Significance: Cerebral blood flow (CBF) imaging is crucial for diagnosing cerebrovascular diseases. However, existing large neuroimaging techniques with high cost, low sampling rate, and poor mobility make them unsuitable for continuous and…

Tissues and Organs · Quantitative Biology 2024-08-26 Faezeh Akbari , Xuhui Liu , Fatemeh Hamedi , Mehrana Mohtasebi , Lei Chen , Guoqiang Yu

Fluorescence microscopy has enabled a dramatic development in modern biology. Due to its inherently weak signal, fluorescence microscopy is not only much noisier than photography, but also presented with Poisson-Gaussian noise where Poisson…

Computer Vision and Pattern Recognition · Computer Science 2019-04-09 Yide Zhang , Yinhao Zhu , Evan Nichols , Qingfei Wang , Siyuan Zhang , Cody Smith , Scott Howard

Solving 3D medical inverse problems such as image restoration and reconstruction is crucial in modern medical field. However, the curse of dimensionality in 3D medical data leads mainstream volume-wise methods to suffer from high resource…

Image and Video Processing · Electrical Eng. & Systems 2024-05-27 Jia He , Bonan Li , Ge Yang , Ziwen Liu

Robotic-assisted surgery allows surgeons to conduct precise surgical operations with stereo vision and flexible motor control. However, the lack of 3D spatial perception limits situational awareness during procedures and hinders mastering…

Image and Video Processing · Electrical Eng. & Systems 2022-03-07 Shang Zhao , Ce Wang , Qiyuan Wang , Yanzhe Liu , S Kevin Zhou

Monitoring diseases that affect the brain's structural integrity requires automated analysis of magnetic resonance (MR) images, e.g., for the evaluation of volumetric changes. However, many of the evaluation tools are optimized for…

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