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Large-scale graph training is a notoriously challenging problem for graph neural networks (GNNs). Due to the nature of evolving graph structures into the training process, vanilla GNNs usually fail to scale up, limited by the GPU memory…

Machine Learning · Computer Science 2023-03-02 Keyu Duan , Zirui Liu , Peihao Wang , Wenqing Zheng , Kaixiong Zhou , Tianlong Chen , Xia Hu , Zhangyang Wang

Graph Convolutional Networks (GCNs) have emerged as the state-of-the-art method for graph-based learning tasks. However, training GCNs at scale is still challenging, hindering both the exploration of more sophisticated GCN architectures and…

Machine Learning · Computer Science 2022-03-29 Cheng Wan , Youjie Li , Ang Li , Nam Sung Kim , Yingyan Lin

As graphs grow larger, full-batch GNN training becomes hard for single GPU memory. Therefore, to enhance the scalability of GNN training, some studies have proposed sampling-based mini-batch training and distributed graph learning. However,…

Machine Learning · Computer Science 2024-08-22 Zhengjia Xu , Dingyang Lyu , Jinghui Zhang

Graph Neural Networks (GNNs) have achieved state-of-the-art (SOTA) performance in diverse domains. However, training GNNs on large-scale graphs poses significant challenges due to high memory demands and significant communication overhead…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-19 Arefin Niam , M S Q Zulkar Nine

Owing to their remarkable representation capabilities for heterogeneous graph data, Heterogeneous Graph Neural Networks (HGNNs) have been widely adopted in many critical real-world domains such as recommendation systems and medical…

Machine Learning · Computer Science 2024-10-30 Dengke Han , Mingyu Yan , Xiaochun Ye , Dongrui Fan

Dynamic Graph Neural Networks (DGNNs) have been broadly applied in various real-life applications, such as link prediction and pandemic forecast, to capture both static structural information and temporal characteristics from dynamic…

Machine Learning · Computer Science 2023-06-13 Chunyang Wang , Desen Sun , Yuebin Bai

Recent works on representation learning for graph structured data predominantly focus on learning distributed representations of graph substructures such as nodes and subgraphs. However, many graph analytics tasks such as graph…

Artificial Intelligence · Computer Science 2017-07-18 Annamalai Narayanan , Mahinthan Chandramohan , Rajasekar Venkatesan , Lihui Chen , Yang Liu , Shantanu Jaiswal

Graph neural networks (GNNs) are machine learning models specialized for graph data and widely used in many applications. To train GNNs on large graphs that exceed CPU memory, several systems store data on disk and conduct out-of-core…

Machine Learning · Computer Science 2025-02-18 Renjie Liu , Yichuan Wang , Xiao Yan , Haitian Jiang , Zhenkun Cai , Minjie Wang , Bo Tang , Jinyang Li

Graph Neural Networks (GNNs) have gained significant attention in recent years due to their ability to learn representations of graph-structured data. Two common methods for training GNNs are mini-batch training and full-graph training.…

Machine Learning · Computer Science 2024-12-24 Saurabh Bajaj , Hojae Son , Juelin Liu , Hui Guan , Marco Serafini

Distributed training using multiple devices (e.g., GPUs) has been widely adopted for learning DNN models over large datasets. However, the performance of large-scale distributed training tends to be far from linear speed-up in practice.…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-19 Hanpeng Hu , Chenyu Jiang , Yuchen Zhong , Yanghua Peng , Chuan Wu , Yibo Zhu , Haibin Lin , Chuanxiong Guo

Predicting drug-gene associations is crucial for drug development and disease treatment. While graph neural networks (GNN) have shown effectiveness in this task, they face challenges with data sparsity and efficient contrastive learning…

Machine Learning · Computer Science 2025-02-14 Jiayang Wu , Wensheng Gan , Philip S. Yu

Real-world graphs, such as social networks, financial transactions, and recommendation systems, often demonstrate dynamic behavior. This phenomenon, known as graph stream, involves the dynamic changes of nodes and the emergence and…

Machine Learning · Computer Science 2023-05-16 Yanping Zheng , Zhewei Wei , Jiajun Liu

The widely-adopted practice is to train deep learning models with specialized hardware accelerators, e.g., GPUs or TPUs, due to their superior performance on linear algebra operations. However, this strategy does not employ effectively the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-04-21 Yujing Ma , Florin Rusu

Graph Neural Networks (GNNs) have emerged as powerful tools for various graph mining tasks, yet existing scalable solutions often struggle to balance execution efficiency with prediction accuracy. These difficulties stem from iterative…

Machine Learning · Computer Science 2026-04-02 Xu Cheng , Liang Yao , Feng He , Yukuo Cen , Yufei He , Chenhui Zhang , Wenzheng Feng , Hongyun Cai , Jie Tang

In this work we apply model averaging to parallel training of deep neural network (DNN). Parallelization is done in a model averaging manner. Data is partitioned and distributed to different nodes for local model updates, and model…

Machine Learning · Computer Science 2018-07-03 Hang Su , Haoyu Chen

Graph convolutional network (GCN) has been successfully applied to many graph-based applications; however, training a large-scale GCN remains challenging. Current SGD-based algorithms suffer from either a high computational cost that…

Machine Learning · Computer Science 2019-08-09 Wei-Lin Chiang , Xuanqing Liu , Si Si , Yang Li , Samy Bengio , Cho-Jui Hsieh

Equivariant Graph Neural Networks (eGNNs) trained on density-functional theory (DFT) data can potentially perform electronic structure prediction at unprecedented scales, enabling investigation of the electronic properties of materials with…

Machine Learning · Computer Science 2025-07-08 Manasa Kaniselvan , Alexander Maeder , Chen Hao Xia , Alexandros Nikolaos Ziogas , Mathieu Luisier

This paper presents a general graph representation learning framework called DeepGL for learning deep node and edge representations from large (attributed) graphs. In particular, DeepGL begins by deriving a set of base features (e.g.,…

Machine Learning · Statistics 2017-10-17 Ryan A. Rossi , Rong Zhou , Nesreen K. Ahmed

Graph Neural Networks (GNNs) are proficient in graph representation learning and achieve promising performance on versatile tasks such as node classification and link prediction. Usually, a comprehensive hyperparameter tuning is essential…

Machine Learning · Computer Science 2024-10-10 Lequan Lin , Dai Shi , Andi Han , Zhiyong Wang , Junbin Gao

Training Graph Neural Networks (GNN) on large graphs is resource-intensive and time-consuming, mainly due to the large graph data that cannot be fit into the memory of a single machine, but have to be fetched from distributed graph storage…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-23 Ziyue Luo , Yixin Bao , Chuan Wu
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