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The alignment of serial-section electron microscopy (ssEM) images is critical for efforts in neuroscience that seek to reconstruct neuronal circuits. However, each ssEM plane contains densely packed structures that vary from one section to…

Computer Vision and Pattern Recognition · Computer Science 2017-12-06 Inwan Yoo , David G. C. Hildebrand , Willie F. Tobin , Wei-Chung Allen Lee , Won-Ki Jeong

Convolutional neural network (CNN) based methods have achieved great successes in medical image segmentation, but their capability to learn global representations is still limited due to using small effective receptive fields of convolution…

Computer Vision and Pattern Recognition · Computer Science 2022-11-17 Pengfei Gu , Yejia Zhang , Chaoli Wang , Danny Z. Chen

In this paper, we propose a novel medical image segmentation using iterative deep learning framework. We have combined an iterative learning approach and an encoder-decoder network to improve segmentation results, which enables to precisely…

Computer Vision and Pattern Recognition · Computer Science 2017-08-14 Jung Uk Kim , Hak Gu Kim , Yong Man Ro

Hyperspectral image (HSI) classification (HSIC) requires effective modeling of complex spatial-spectral dependencies under limited labeled data and high dimensionality. While transformer-based models have shown strong capability in…

Computer Vision and Pattern Recognition · Computer Science 2026-03-18 Muhammad Ahmad

Semantic segmentation has witnessed remarkable advancements with the adaptation of the Transformer architecture. Parallel to the strides made by the Transformer, CNN-based U-Net has seen significant progress, especially in high-resolution…

Computer Vision and Pattern Recognition · Computer Science 2023-12-12 Seul-Ki Yeom , Julian von Klitzing

Current methods for medical image segmentation primarily focus on extracting contextual feature information from the perspective of the whole image. While these methods have shown effective performance, none of them take into account the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-12 Jianjian Yin , Yi Chen , Chengyu Li , Zhichao Zheng , Yanhui Gu , Junsheng Zhou

Scene segmentation in images is a fundamental yet challenging problem in visual content understanding, which is to learn a model to assign every image pixel to a categorical label. One of the challenges for this learning task is to consider…

Computer Vision and Pattern Recognition · Computer Science 2022-07-12 Litao Yu , Zhibin Li , Jian Zhang , Qiang Wu

Recently, deep learning methods have achieved state-of-the-art performance in many medical image segmentation tasks. Many of these are based on convolutional neural networks (CNNs). For such methods, the encoder is the key part for global…

Image and Video Processing · Electrical Eng. & Systems 2022-08-25 Hao Li , Dewei Hu , Han Liu , Jiacheng Wang , Ipek Oguz

Vision transformers are effective deep learning models for vision tasks, including medical image segmentation. However, they lack efficiency and translational invariance, unlike convolutional neural networks (CNNs). To model long-range…

Image and Video Processing · Electrical Eng. & Systems 2023-08-15 Liam Chalcroft , Ruben Lourenço Pereira , Mikael Brudfors , Andrew S. Kayser , Mark D'Esposito , Cathy J. Price , Ioannis Pappas , John Ashburner

Utilizing transformer architectures for semantic segmentation of high-resolution images is hindered by the attention's quadratic computational complexity in the number of tokens. A solution to this challenge involves decreasing the number…

Computer Vision and Pattern Recognition · Computer Science 2024-05-24 Daniel Kienzle , Marco Kantonis , Robin Schön , Rainer Lienhart

In the past decades, deep neural networks, particularly convolutional neural networks, have achieved state-of-the-art performance in a variety of medical image segmentation tasks. Recently, the introduction of the vision transformer (ViT)…

Computer Vision and Pattern Recognition · Computer Science 2024-09-18 Peijie Qiu , Jin Yang , Sayantan Kumar , Soumyendu Sekhar Ghosh , Aristeidis Sotiras

In recent years, transformer-based models have exhibited considerable potential in point cloud instance segmentation. Despite the promising performance achieved by existing methods, they encounter challenges such as instance query…

Computer Vision and Pattern Recognition · Computer Science 2026-02-27 Lei Yao , Yi Wang , Moyun Liu , Lap-Pui Chau

Magnetic resonance imaging (MRI) is an important non-invasive clinical tool that can produce high-resolution and reproducible images. However, a long scanning time is required for high-quality MR images, which leads to exhaustion and…

Image and Video Processing · Electrical Eng. & Systems 2022-04-12 Jiahao Huang , Yingying Fang , Yinzhe Wu , Huanjun Wu , Zhifan Gao , Yang Li , Javier Del Ser , Jun Xia , Guang Yang

Magnetic resonance imaging (MRI) is critically important for brain mapping in both scientific research and clinical studies. Precise segmentation of brain tumors facilitates clinical diagnosis, evaluations, and surgical planning. Deep…

Image and Video Processing · Electrical Eng. & Systems 2023-05-01 Rui Nian , Guoyao Zhang , Yao Sui , Yuqi Qian , Qiuying Li , Mingzhang Zhao , Jianhui Li , Ali Gholipour , Simon K. Warfield

Accurate and efficient brain tumor segmentation remains a critical challenge in neuroimaging due to the heterogeneous nature of tumor subregions and the high computational cost of volumetric inference. In this paper, we propose…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Fatemeh Ziaeetabar

Transformer-based neural networks have surpassed promising performance on many biomedical image segmentation tasks due to a better global information modeling from the self-attention mechanism. However, most methods are still designed for…

Computer Vision and Pattern Recognition · Computer Science 2023-02-02 Zheyuan Zhang , Ulas Bagci

In medical image analysis, achieving fast, efficient, and accurate segmentation is essential for automated diagnosis and treatment. Although recent advancements in deep learning have significantly improved segmentation accuracy, current…

Computer Vision and Pattern Recognition · Computer Science 2024-12-02 Zhi Li , Kai Zhao , Yaqi Wang , Shuai Wang

Recently, deep learning methods have been widely used for tumor segmentation of multimodal medical images with promising results. However, most existing methods are limited by insufficient representational ability, specific modality number…

Image and Video Processing · Electrical Eng. & Systems 2023-07-06 Jun Shi , Hongyu Kan , Shulan Ruan , Ziqi Zhu , Minfan Zhao , Liang Qiao , Zhaohui Wang , Hong An , Xudong Xue

We present a High-Resolution Transformer (HRFormer) that learns high-resolution representations for dense prediction tasks, in contrast to the original Vision Transformer that produces low-resolution representations and has high memory and…

Computer Vision and Pattern Recognition · Computer Science 2021-11-09 Yuhui Yuan , Rao Fu , Lang Huang , Weihong Lin , Chao Zhang , Xilin Chen , Jingdong Wang

One of the common and promising deep learning approaches used for medical image segmentation is transformers, as they can capture long-range dependencies among the pixels by utilizing self-attention. Despite being successful in medical…

Computer Vision and Pattern Recognition · Computer Science 2023-11-01 Md Motiur Rahman , Shiva Shokouhmand , Smriti Bhatt , Miad Faezipour