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This thesis develops the theory of sheaves and cosheaves with an eye towards applications in science and engineering. To provide a theory that is computable, we focus on a combinatorial version of sheaves and cosheaves called cellular…

Algebraic Topology · Mathematics 2014-12-18 Justin Curry

Topological data analysis uses tools from topology -- the mathematical area that studies shapes -- to create representations of data. In particular, in persistent homology, one studies one-parameter families of spaces associated with data,…

Machine Learning · Computer Science 2020-12-01 Guido Montúfar , Nina Otter , Yuguang Wang

Graph Laplacians on finite compact metric graphs are considered under the assumption that the matching conditions at the graph vertices are of either $\delta$ or $\delta'$ type. In either case, an infinite series of trace formulae which…

Mathematical Physics · Physics 2014-04-01 Yulia Ershova , Alexander V. Kiselev

Multilayer networks have permeated all the sciences as a powerful mathematical abstraction for interdependent heterogenous complex systems such as multimodal brain connectomes, transportation, ecological systems, and scientific…

Algebraic Topology · Mathematics 2023-06-28 Elkaïoum M. Moutuou , Obaï B. K. Ali , Habib Benali

Topological data analysis provides a set of tools to uncover low-dimensional structure in noisy point clouds. Prominent amongst the tools is persistence homology, which summarizes birth-death times of homological features using data objects…

Methodology · Statistics 2024-02-05 James Matuk , Sebastian Kurtek , Karthik Bharath

Artificial neural networks can learn complex, salient data features to achieve a given task. On the opposite end of the spectrum, mathematically grounded methods such as topological data analysis allow users to design analysis pipelines…

Machine Learning · Computer Science 2022-12-29 Mattia G. Bergomi , Massimo Ferri , Alessandro Mella , Pietro Vertechi

Signed graphs have appeared in a broad variety of applications, ranging from social networks to biological networks, from distributed control and computation to power systems. In this paper, we investigate spectral properties of signed…

Systems and Control · Electrical Eng. & Systems 2020-09-09 Wei Chen , Dan Wang , Ji Liu , Yongxin Chen , Sei Zhen Khong , Tamer Başar , Karl H. Johansson , Li Qiu

We generalize cellular sheaf Laplacians on an ordered finite abstract simplicial complex to the set of simplices of a symmetric simplicial set. We construct a functor from the category of hypergraphs to the category of finite symmetric…

Algebraic Topology · Mathematics 2024-11-14 Seongjin Choi , Junyeong Park

In recent years, spectral clustering has become one of the most popular modern clustering algorithms. It is simple to implement, can be solved efficiently by standard linear algebra software, and very often outperforms traditional…

Data Structures and Algorithms · Computer Science 2007-11-02 Ulrike von Luxburg

Computational topology provides a tool, persistent homology, to extract quantitative descriptors from structured objects (images, graphs, point clouds, etc). These descriptors can then be involved in optimization problems, typically as a…

Computational Geometry · Computer Science 2026-03-27 Mathieu Carriere , Yuichi Ike , Théo Lacombe , Naoki Nishikawa

Hypergraphs extend traditional graphs by enabling the representation of N-ary relationships through higher-order edges. Akin to a common approach of deriving graph Laplacians, we define function spaces and corresponding symmetric products…

Differential Geometry · Mathematics 2026-03-27 Jo Andersson Stokke , Ronny Bergmann , Martin Hanik , Christoph von Tycowicz

The rich spectral information of the graph Laplacian has been instrumental in graph theory, machine learning, and graph signal processing for applications such as graph classification, clustering, or eigenmode analysis. Recently, the Hodge…

Algebraic Topology · Mathematics 2024-03-27 Vincent P. Grande , Michael T. Schaub

Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…

Machine Learning · Computer Science 2024-12-20 Rubén Ballester , Bastian Rieck

In recent years, machine learning models have been increasingly applied to spectroscopic datasets for chemical and biomedical analysis. For their successful adoption, particularly in clinical and safety-critical settings, professionals and…

As key subjects in spectral geometry and combinatorial graph theory respectively, the (continuous) Hodge Laplacian and the combinatorial Laplacian share similarities in revealing the topological dimension and geometric shape of data and in…

Differential Geometry · Mathematics 2023-10-31 Emily Ribando-Gros , Rui Wang , Jiahui Chen , Yiying Tong , Guo-Wei Wei

Hyperuniformity, the suppression of density fluctuations at large length scales, is observed across a wide variety of domains, from cosmology to condensed matter and biological systems. Although the standard definition of hyperuniformity…

Statistical Mechanics · Physics 2024-05-07 Marco Salvalaglio , Dominic J. Skinner , Jörn Dunkel , Axel Voigt

Laplacian operators on finite compact metric graphs are considered under the assumption that matching conditions at graph vertices are of $\delta$ and $\delta'$ types. An infinite series of trace formulae is obtained which link together two…

Spectral Theory · Mathematics 2014-11-06 Yulia Ershova , Irina I. Karpenko , Alexander V. Kiselev

In this paper, we apply persistent entropy, a novel topological statistic, for characterization of images of epithelial tissues. We have found out that persistent entropy is able to summarize topological and geometric information encoded by…

Image and Video Processing · Electrical Eng. & Systems 2021-05-19 N. Atienza , L. M. Escudero , M. J. Jimenez , M. Soriano-Trigueros

Multiplexed imaging allows multiple cell types to be simultaneously visualised in a single tissue sample, generating unprecedented amounts of spatially-resolved, biological data. In topological data analysis, persistent homology provides…

Quantitative Methods · Quantitative Biology 2025-05-06 Maria Torras-Pérez , Iris H. R. Yoon , Praveen Weeratunga , Ling-Pei Ho , Helen M. Byrne , Ulrike Tillmann , Heather A. Harrington

In topological data analysis (TDA), one often studies the shape of data by constructing a filtered topological space, whose structure is then examined using persistent homology. However, a single filtered space often does not adequately…

Algebraic Topology · Mathematics 2023-03-14 Magnus Bakke Botnan , Michael Lesnick