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Alzheimer's disease (AD) is a neurodegenerative disorder and the most common cause of dementia in the elderly. The extracellular accumulation of amyloid-$\beta$ (A$\beta$) in senile plaques is a principal event in the pathogenesis and there…

Medical Physics · Physics 2018-03-12 E. G. Lobanova , S. V. Lobanov , K. Triantafilou , W. Langbein , P. Borri

Recent experiments with amyloid-beta (Abeta) peptide suggest that formation of toxic oligomers may be an important contribution to the onset of Alzheimer's disease. The toxicity of Abeta oligomers depends on their structure, which is…

Biological Physics · Physics 2009-11-10 B. Urbanc , L. Cruz , F. Ding , D. Sammond , S. Khare , S. V. Buldyrev , H. E. Stanley , N. V. Dokholyan

Alzheimer's disease (AD) is a common form of dementia observed in the elderly due to neurodegenerative disorder and dysfunction. This arises from alterations in synaptic functioning of neurons leading to cognitive impairment and memory…

Neurons and Cognition · Quantitative Biology 2010-11-19 V. Resmi , G. Ambika , R. E. Amritkar , G. Rangarajan

A model of lipid bilayers made of a mixture of two lipids with different average compositions on both leaflets, is developed. A Landau hamiltonian describing the lipid-lipid interactions on each leaflet, with two lipidic fields $\psi_1$ and…

Soft Condensed Matter · Physics 2014-08-28 Guillaume Gueguen , Nicolas Destainville , Manoel Manghi

The presence of oligomeric aggregates, which is often observed during the process of amyloid formation, has recently attracted much attention since it has been associated with neurodegenerative conditions such as Alzheimer's and Parkinson's…

Biomolecules · Quantitative Biology 2009-01-14 Stefan Auer , Filip Meersman , Christopher M. Dobson , Michele Vendruscolo

Peptides and proteins exhibit a common tendency to assemble into highly ordered fibrillar aggregates, whose formation proceeds in a nucleation-dependent manner that is often preceded by the formation of disordered oligomeric assemblies.…

Biomolecules · Quantitative Biology 2009-01-14 Stefan Auer , Christopher M. Dobson , Michele Vendruscolo , Amos Maritan

Accumulation of amyloid beta proteins is a defining feature of Alzheimer's disease, and is usually accompanied by cerebrovascular pathology. Evidence suggests that amyloid beta and cerebrovascular pathology are mutually reinforcing; in…

Numerical Analysis · Mathematics 2026-01-14 Mattia Corti , Andrew Ahern , Alain Goriely , Ellen Kuhl , Paola F. Antonietti

Amphipathic peptides are considered promising antibiotics because of their ability to form pores in bacterial membranes. In two companion papers, we analyzed both experimentally and theoretically the mechanisms and consequences of the…

Alzheimer's disease (AD) is driven by the accumulation of amyloid-beta (Abeta) proteins in the brain, leading to memory loss and cognitive decline. While monoclonal antibodies targeting Abetahave been approved, optimizing their use to…

Quantitative Methods · Quantitative Biology 2025-03-13 Kobra Rabiei , Jeffrey R. Petrella , Suzanne Lenhart , Chun Liu , P. Murali Doraiswamy , Wenrui Hao

The formation of amyloid fibrils comprising amyloid $\beta$ (A$\beta$) peptides is associated with the pathology of Alzheimer's disease. In this study, we theoretically investigated the A$\beta$ structure at the fibril end using the density…

Biological Physics · Physics 2025-05-15 Yasuhiro Oishi , Motoharu Kitatani , Kichitaro Nakajima , Hirotsugu Ogi , Koichi Kusakabe

Antimicrobial peptides (AMPs) have intrigued researchers for decades due to the contradiction between their high potential against resistant bacteria and the inability to find a structure-function relationship for the development of an…

Soft Condensed Matter · Physics 2025-02-14 Marta V. Volovik , Zaret G. Denieva , Oleg V. Kondrashov , Sergey A. Akimov , Oleg V. Batishchev

We develop a general theory for three states of equilibrium of amyloid peptides: the monomer, oligomer, and fibril. We assume that the oligomeric state is a disordered micelle-like collection of a few peptide chains held together loosely by…

Soft Condensed Matter · Physics 2015-05-19 Jeremy Schmit , Kingshuk Ghosh , Ken Dill

The need to understand the assembly kinetics of fibril formation has become urgent because of the realization that soluble oligomers of amyloidogenic peptides may be even more neurotoxic than the end product, namely, the amyloid fibrils. In…

Biomolecules · Quantitative Biology 2007-05-23 Ruxandra I. Dima , Bogdan Tarus , John E. Straub , D. Thirumalai

Using atomic force microscopy (AFM) we investigated the interaction of amyloid beta (Ab) (1 42) peptide with chemically modified surfaces in order to better understand the mechanism of amyloid toxicity, which involves interaction of amyloid…

Biological Physics · Physics 2017-04-28 Brad Moores , Elizabeth Drolle , Simon Attwood , Janet Simons , Zoya Leonenko

Protein oligomers have been implicated as toxic agents in a wide range of amyloid-related diseases. Yet it has remained unsolved whether the oligomers are a necessary step in the formation of amyloid fibrils, or just a dangerous by-product.…

Biomolecules · Quantitative Biology 2014-12-03 Anđela Šarić , Yassmine C. Chebaro , Tuomas P. J. Knowles , Daan Frenkel

Alzheimer's disease causes severe neurodegeneration in the brain that leads to a certain death. The defining factor is the formation of extracellular senile amyloid plaques in the brain. However, therapeutic approaches to remove them have…

Biomolecules · Quantitative Biology 2011-09-07 Andrei Krokhotin , Antti J. Niemi

Structural MRI-to-amyloid PET synthesis has been proposed as a non-invasive alternative for amyloid assessment in Alzheimer's disease (AD). However, reported performance of identical models varies widely across studies, and increasingly…

Computer Vision and Pattern Recognition · Computer Science 2026-05-27 Louise E. G. Baron , Ross Callaghan , David M. Cash , Philip S. J. Weston , Hojjat Azadbakht , Hui Zhang

The link between metals, Alzheimers disease (AD) and its implicated protein, amyloid \b{eta} (A\b{eta}), is complex and highly studied. AD is believed to occur as a result of the misfolding and aggregation of A\b{eta}. The dyshomeostasis of…

Biological Physics · Physics 2017-04-28 Francis Hane , Gary Tran , Simon Attwood , Zoya Leonenko

Membrane organization is essential for cellular functions such as signal transduction and membrane trafficking. A major challenge is to understand the lateral heterogeneous structures in membranes and membrane fluidity in the presence of…

Soft Condensed Matter · Physics 2007-11-09 Chun-Lai Ren , Yu-qiang Ma

Pathological folding and oligomer formation of the amyloid beta-protein (Abeta) are widely perceived as central to Alzheimer's disease (AD). Experimental approaches to study Abeta self-assembly are problematic, because most relevant…

Biomolecules · Quantitative Biology 2009-11-13 Sijung Yun , Brigita Urbanc , Luis Cruz , Gal Bitan , David B. Teplow , H. Eugene Stanley