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A large-scale labeled dataset is a key factor for the success of supervised deep learning in computer vision. However, a limited number of annotated data is very common, especially in ophthalmic image analysis, since manual annotation is…

Image and Video Processing · Electrical Eng. & Systems 2022-03-15 Zhiyuan Cai , Li Lin , Huaqing He , Xiaoying Tang

Medical image analysis suffers from a shortage of data, whether annotated or not. This becomes even more pronounced when it comes to 3D medical images. Self-Supervised Learning (SSL) can partially ease this situation by using unlabeled…

Computer Vision and Pattern Recognition · Computer Science 2024-07-08 Fei Gao , Siwen Wang , Fandong Zhang , Hong-Yu Zhou , Yizhou Wang , Churan Wang , Gang Yu , Yizhou Yu

Collecting large-scale medical datasets with fully annotated samples for training of deep networks is prohibitively expensive, especially for 3D volume data. Recent breakthroughs in self-supervised learning (SSL) offer the ability to…

Computer Vision and Pattern Recognition · Computer Science 2022-12-06 Duy M. H. Nguyen , Hoang Nguyen , Mai T. N. Truong , Tri Cao , Binh T. Nguyen , Nhat Ho , Paul Swoboda , Shadi Albarqouni , Pengtao Xie , Daniel Sonntag

Self-Supervised Learning (SSL) presents an exciting opportunity to unlock the potential of vast, untapped clinical datasets, for various downstream applications that suffer from the scarcity of labeled data. While SSL has revolutionized…

Computer Vision and Pattern Recognition · Computer Science 2025-04-07 Tassilo Wald , Constantin Ulrich , Stanislav Lukyanenko , Andrei Goncharov , Alberto Paderno , Maximilian Miller , Leander Maerkisch , Paul F. Jäger , Klaus Maier-Hein

Masked image modeling (MIM) with transformer backbones has recently been exploited as a powerful self-supervised pre-training technique. The existing MIM methods adopt the strategy to mask random patches of the image and reconstruct the…

Computer Vision and Pattern Recognition · Computer Science 2024-02-05 Zhaohu Xing , Lei Zhu , Lequan Yu , Zhiheng Xing , Liang Wan

The Vision Transformer (ViT) has demonstrated remarkable performance in Self-Supervised Learning (SSL) for 3D medical image analysis. Masked AutoEncoder (MAE) for feature pre-training can further unleash the potential of ViT on various…

Computer Vision and Pattern Recognition · Computer Science 2025-01-13 Jiaxin Zhuang , Linshan Wu , Qiong Wang , Peng Fei , Varut Vardhanabhuti , Lin Luo , Hao Chen

Medical ultrasound image segmentation faces significant challenges due to limited labeled data and characteristic imaging artifacts including speckle noise and low-contrast boundaries. While semi-supervised learning (SSL) approaches have…

Computer Vision and Pattern Recognition · Computer Science 2026-03-20 Jingguo Qu , Xinyang Han , Yao Pu , Man-Lik Chui , Simon Takadiyi Gunda , Ziman Chen , Jing Qin , Ann Dorothy King , Winnie Chiu-Wing Chu , Jing Cai , Michael Tin-Cheung Ying

Ultrasound (US) imaging is clinically invaluable due to its noninvasive and safe nature. However, interpreting US images is challenging, requires significant expertise, and time, and is often prone to errors. Deep learning offers assistive…

Computer Vision and Pattern Recognition · Computer Science 2025-02-05 Edward Ellis , Andrew Bulpitt , Nasim Parsa , Michael F Byrne , Sharib Ali

Self-supervised learning (SSL) has emerged as a powerful paradigm for medical image representation learning, particularly in settings with limited labeled data. However, existing SSL methods often rely on complex architectures,…

Computer Vision and Pattern Recognition · Computer Science 2025-09-24 Azad Singh , Deepak Mishra

Medical image retrieval is essential for clinical decision-making and translational research, relying on discriminative visual representations. Yet, current methods remain fragmented, relying on separate architectures and training…

Computer Vision and Pattern Recognition · Computer Science 2025-09-03 Che Liu , Zheng Jiang , Chengyu Fang , Heng Guo , Yan-Jie Zhou , Jiaqi Qu , Le Lu , Minfeng Xu

While deep learning models have become the predominant method for medical image segmentation, they are typically not capable of generalizing to unseen segmentation tasks involving new anatomies, image modalities, or labels. Given a new…

Computer Vision and Pattern Recognition · Computer Science 2023-04-14 Victor Ion Butoi , Jose Javier Gonzalez Ortiz , Tianyu Ma , Mert R. Sabuncu , John Guttag , Adrian V. Dalca

The demand for high-resolution, non-invasive imaging continues to drive innovation in magnetic resonance imaging (MRI), but long acquisition times remain a major practical limitation. Although deep learning-based reconstruction methods have…

Image and Video Processing · Electrical Eng. & Systems 2026-05-07 Siying Xu , Kerstin Hammernik , Daniel Rueckert , Sergios Gatidis , Thomas Küstner

U-Nets have achieved tremendous success in medical image segmentation. Nevertheless, it may suffer limitations in global (long-range) contextual interactions and edge-detail preservation. In contrast, Transformer has an excellent ability to…

Computer Vision and Pattern Recognition · Computer Science 2022-06-03 Nan Wang , Shaohui Lin , Xiaoxiao Li , Ke Li , Yunhang Shen , Yue Gao , Lizhuang Ma

Understanding 3D medical image volumes is critical in the medical field, yet existing 3D medical convolution and transformer-based self-supervised learning (SSL) methods often lack deep semantic comprehension. Recent advancements in…

Computer Vision and Pattern Recognition · Computer Science 2025-09-12 Qiuhui Chen , Xuancheng Yao , Huping Ye , Yi Hong

The field of self-supervised learning (SSL) for 3D medical images lacks consistency and standardization. While many methods have been developed, it is impossible to identify the current state-of-the-art, due to i) varying and small…

Computer Vision and Pattern Recognition · Computer Science 2025-04-21 Tassilo Wald , Constantin Ulrich , Jonathan Suprijadi , Sebastian Ziegler , Michal Nohel , Robin Peretzke , Gregor Köhler , Klaus H. Maier-Hein

Vision transformers, with their ability to more efficiently model long-range context, have demonstrated impressive accuracy gains in several computer vision and medical image analysis tasks including segmentation. However, such methods need…

Image and Video Processing · Electrical Eng. & Systems 2022-09-27 Jue Jiang , Neelam Tyagi , Kathryn Tringale , Christopher Crane , Harini Veeraraghavan

Self-supervised learning (SSL) has led to important breakthroughs in computer vision by allowing learning from large amounts of unlabeled data. As such, it might have a pivotal role to play in biomedicine where annotating data requires a…

Computer Vision and Pattern Recognition · Computer Science 2024-03-14 Roy Hirsch , Mathilde Caron , Regev Cohen , Amir Livne , Ron Shapiro , Tomer Golany , Roman Goldenberg , Daniel Freedman , Ehud Rivlin

Whole slide imaging is fundamental to biomedical microscopy and computational pathology. Previously, learning representations for gigapixel-sized whole slide images (WSIs) has relied on multiple instance learning with weak labels, which do…

Computer Vision and Pattern Recognition · Computer Science 2024-05-27 Xinhai Hou , Cheng Jiang , Akhil Kondepudi , Yiwei Lyu , Asadur Chowdury , Honglak Lee , Todd C. Hollon

Recent advancements in large-scale Vision Transformers have made significant strides in improving pre-trained models for medical image segmentation. However, these methods face a notable challenge in acquiring a substantial amount of…

Computer Vision and Pattern Recognition · Computer Science 2023-07-25 Yiqing Wang , Zihan Li , Jieru Mei , Zihao Wei , Li Liu , Chen Wang , Shengtian Sang , Alan Yuille , Cihang Xie , Yuyin Zhou

Semi-supervised learning (SSL) has attracted much attention since it reduces the expensive costs of collecting adequate well-labeled training data, especially for deep learning methods. However, traditional SSL is built upon an assumption…

Computer Vision and Pattern Recognition · Computer Science 2024-07-03 Lie Ju , Yicheng Wu , Wei Feng , Zhen Yu , Lin Wang , Zhuoting Zhu , Zongyuan Ge
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