Related papers: MedGraph: An experimental semantic information ret…
A variety of knowledge graph embedding approaches have been developed. Most of them obtain embeddings by learning the structure of the knowledge graph within a link prediction setting. As a result, the embeddings reflect only the structure…
Scientists always look for the most accurate and relevant answer to their queries on the scholarly literature. Traditional scholarly search systems list documents instead of providing direct answers to the search queries. As data in…
We introduce a framework for AI-based medical consultation system with knowledge graph embedding and reinforcement learning components and its implement. Our implement of this framework leverages knowledge organized as a graph to have…
Most of the existing medicine recommendation systems that are mainly based on electronic medical records (EMRs) are significantly assisting doctors to make better clinical decisions benefiting both patients and caregivers. Even though the…
The continuous growth of scientific literature brings innovations and, at the same time, raises new challenges. One of them is related to the fact that its analysis has become difficult due to the high volume of published papers for which…
Recently, biomedical version of embeddings obtained from language models such as BioELMo have shown state-of-the-art results for the textual inference task in the medical domain. In this paper, we explore how to incorporate structured…
The terminology used in Biomedicine shows lexical peculiarities that have required the elaboration of terminological resources and information retrieval systems with specific functionalities. The main characteristics are the high rates of…
In Question Answering (QA), Retrieval Augmented Generation (RAG) has revolutionized performance in various domains. However, how to effectively capture multi-document relationships, particularly critical for biomedical tasks, remains an…
The task of expert finding has been getting increasing attention in information retrieval literature. However, the current state-of-the-art is still lacking in principled approaches for combining different sources of evidence in an optimal…
Pre-trained language models (PLMs) have proven to be effective for document re-ranking task. However, they lack the ability to fully interpret the semantics of biomedical and health-care queries and often rely on simplistic patterns for…
To resolve the semantic ambiguity in texts, we propose a model, which innovatively combines a knowledge graph with an improved attention mechanism. An existing knowledge base is utilized to enrich the text with relevant contextual concepts.…
The injection of domain-specific knowledge is crucial for adapting language models (LMs) to specialized fields such as biomedicine. While most current approaches rely on unstructured text corpora, this study explores two complementary…
Neural approaches to learning term embeddings have led to improved computation of similarity and ranking in information retrieval (IR). So far neural representation learning has not been extended to meta-textual information that is readily…
Keeping track of the ever-increasing body of scientific literature is an escalating challenge. We present PubTree a hierarchical search tool that efficiently searches the PubMed/MEDLINE dataset based upon a decision tree constructed using…
This paper describes a new kind of knowledge representation and mining system which we are calling the Semantic Knowledge Graph. At its heart, the Semantic Knowledge Graph leverages an inverted index, along with a complementary uninverted…
Representation learning provides new and powerful graph analytical approaches and tools for the highly valued data science challenge of mining knowledge graphs. Since previous graph analytical methods have mostly focused on homogeneous…
Nowadays Knowledge Graphs constitute a mainstream approach for the representation of relational information on big heterogeneous data, however, they may contain a big amount of imputed noise when constructed automatically. To address this…
Traditional retrieval methods have been essential for assessing document similarity but struggle with capturing semantic nuances. Despite advancements in latent semantic analysis (LSA) and deep learning, achieving comprehensive semantic…
This project aims to construct and analyze a comprehensive knowledge graph of Nobel Prize and Laureates by enriching existing datasets with biographical information extracted from Wikipedia. Our approach integrates multiple advanced…
With the fast growth of the Internet, more and more information is available on the Web. The Semantic Web has many features which cannot be handled by using the traditional search engines. It extracts metadata for each discovered Web…