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Related papers: An Empirical Study on Relation Extraction in the B…

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Deep learning models have achieved state-of-the-art performances on many relation extraction datasets. A common element in these deep learning models involves the pooling mechanisms where a sequence of hidden vectors is aggregated to…

Computation and Language · Computer Science 2019-11-05 Tuan Ngo Nguyen , Franck Dernoncourt , Thien Huu Nguyen

The advancement of Large Language Models (LLMs) has significantly impacted biomedical Natural Language Processing (NLP), enhancing tasks such as named entity recognition, relation extraction, event extraction, and text classification. In…

Computation and Language · Computer Science 2025-03-04 Zaifu Zhan , Shuang Zhou , Huixue Zhou , Jiawen Deng , Yu Hou , Jeremy Yeung , Rui Zhang

Relation extraction in the biomedical domain is a challenging task due to a lack of labeled data and a long-tail distribution of fact triples. Many works leverage distant supervision which automatically generates labeled data by pairing a…

Computation and Language · Computer Science 2021-10-26 William Hogan , Molly Huang , Yannis Katsis , Tyler Baldwin , Ho-Cheol Kim , Yoshiki Vazquez Baeza , Andrew Bartko , Chun-Nan Hsu

There is growing interest in the automated extraction of relevant information from clinical dialogues. However, it is difficult to collect and construct large annotated resources for clinical dialogue tasks. Recent developments in natural…

Computation and Language · Computer Science 2022-06-07 Zhengyuan Liu , Pavitra Krishnaswamy , Nancy F. Chen

Compositional embedding models build a representation (or embedding) for a linguistic structure based on its component word embeddings. We propose a Feature-rich Compositional Embedding Model (FCM) for relation extraction that is…

Computation and Language · Computer Science 2015-09-16 Matthew R. Gormley , Mo Yu , Mark Dredze

Relation triple extraction, which outputs a set of triples from long sentences, plays a vital role in knowledge acquisition. Large language models can accurately extract triples from simple sentences through few-shot learning or fine-tuning…

Computation and Language · Computer Science 2024-04-16 Zepeng Ding , Wenhao Huang , Jiaqing Liang , Deqing Yang , Yanghua Xiao

Document-level Relation Extraction (DocRE), which aims to extract relations from a long context, is a critical challenge in achieving fine-grained structural comprehension and generating interpretable document representations. Inspired by…

Computation and Language · Computer Science 2023-11-14 Junpeng Li , Zixia Jia , Zilong Zheng

Relation Extraction (RE) has attracted increasing attention, but current RE evaluation is limited to in-domain evaluation setups. Little is known on how well a RE system fares in challenging, but realistic out-of-distribution evaluation…

Computation and Language · Computer Science 2022-10-19 Elisa Bassignana , Barbara Plank

Conventional approaches to relation extraction usually require a fixed set of pre-defined relations. Such requirement is hard to meet in many real applications, especially when new data and relations are emerging incessantly and it is…

Computation and Language · Computer Science 2019-03-27 Hong Wang , Wenhan Xiong , Mo Yu , Xiaoxiao Guo , Shiyu Chang , William Yang Wang

Skill Extraction involves identifying skills and qualifications mentioned in documents such as job postings and resumes. The task is commonly tackled by training supervised models using a sequence labeling approach with BIO tags. However,…

Computation and Language · Computer Science 2024-02-07 Khanh Cao Nguyen , Mike Zhang , Syrielle Montariol , Antoine Bosselut

Because protein-protein interactions (PPIs) are crucial to understand living systems, harvesting these data is essential to probe disease development and discern gene/protein functions and biological processes. Some curated datasets contain…

Biomolecules · Quantitative Biology 2024-03-12 Gilchan Park , Sean McCorkle , Carlos Soto , Ian Blaby , Shinjae Yoo

Relation Extraction (RE) serves as a crucial technology for transforming unstructured text into structured information, especially within the framework of Knowledge Graph development. Its importance is emphasized by its essential role in…

Computation and Language · Computer Science 2024-06-27 Dawulie Jinensibieke , Mieradilijiang Maimaiti , Wentao Xiao , Yuanhang Zheng , Xiaobo Wang

With the growing interest on Network Analysis, Relational Data Mining is becoming an emphasized domain of Data Mining. This paper addresses the problem of extracting representative elements from a relational dataset. After defining the…

Artificial Intelligence · Computer Science 2012-07-05 Frédéric Blanchard , Michel Herbin

Document-level relation extraction (DocRE) attracts more research interest recently. While models achieve consistent performance gains in DocRE, their underlying decision rules are still understudied: Do they make the right predictions…

Computation and Language · Computer Science 2023-06-21 Haotian Chen , Bingsheng Chen , Xiangdong Zhou

With the advent of artificial intelligence (AI), many researchers are attempting to extract structured information from document-level biomedical literature by fine-tuning large language models (LLMs). However, they face significant…

Neural and Evolutionary Computing · Computer Science 2026-02-26 Lei Zhao , Ling Kang , Quan Guo

Sentence-level relation extraction mainly aims to classify the relation between two entities in a sentence. The sentence-level relation extraction corpus often contains data that are difficult for the model to infer or noise data. In this…

Computation and Language · Computer Science 2021-08-05 Seongsik Park , Harksoo Kim

Open domain relation extraction systems identify relation and argument phrases in a sentence without relying on any underlying schema. However, current state-of-the-art relation extraction systems are available only for English because of…

Computation and Language · Computer Science 2021-04-15 Manaal Faruqui , Shankar Kumar

Real applications of natural language document processing are very often confronted with domain specific lexical gaps during the analysis of documents of a new domain. This paper describes an approach for the derivation of domain specific…

Artificial Intelligence · Computer Science 2007-05-23 Manuela Kunze , Dietmar Roesner

Document-level relation extraction faces two overlooked challenges: long-tail problem and multi-label problem. Previous work focuses mainly on obtaining better contextual representations for entity pairs, hardly address the above…

Computation and Language · Computer Science 2022-12-21 Ridong Han , Tao Peng , Benyou Wang , Lu Liu , Xiang Wan

The main purpose of relation extraction is to extract the semantic relationships between tagged pairs of entities in a sentence, which plays an important role in the semantic understanding of sentences and the construction of knowledge…

Computation and Language · Computer Science 2023-03-21 Chenghong Sun , Weidong Ji , Guohui Zhou , Hui Guo , Zengxiang Yin , Yuqi Yue