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Related papers: An Empirical Study on Relation Extraction in the B…

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Biomedical Information Extraction is an exciting field at the crossroads of Natural Language Processing, Biology and Medicine. It encompasses a variety of different tasks that require application of state-of-the-art NLP techniques, such as…

Computation and Language · Computer Science 2017-05-17 Surag Nair

This comprehensive survey delves into the latest advancements in Relation Extraction (RE), a pivotal task in natural language processing essential for applications across biomedical, financial, and legal sectors. This study highlights the…

Computation and Language · Computer Science 2025-07-03 Jose A. Diaz-Garcia , Julio Amador Diaz Lopez

Extracting biomedical relations from large corpora of scientific documents is a challenging natural language processing task. Existing approaches usually focus on identifying a relation either in a single sentence (mention-level) or across…

Computation and Language · Computer Science 2020-11-23 Harshil Shah , Julien Fauqueur

Relation extraction between drugs plays a crucial role in identifying drug drug interactions and predicting side effects. The advancement of machine learning methods in relation extraction, along with the development of large medical text…

Computation and Language · Computer Science 2025-10-28 Ali Fata , Hossein Rahmani , Parinaz Soltanzadeh , Amirhossein Derakhshan , Behrouz Minaei Bidgoli

Biomedical relation extraction (RE) is the task of automatically identifying and characterizing relations between biomedical concepts from free text. RE is a central task in biomedical natural language processing (NLP) research and plays a…

Computation and Language · Computer Science 2023-06-21 Po-Ting Lai , Chih-Hsuan Wei , Ling Luo , Qingyu Chen , Zhiyong Lu

Document-level relation extraction (DocRE) is a task that focuses on identifying relations between entities within a document. However, existing DocRE models often overlook the correlation between relations and lack a quantitative analysis…

Information Retrieval · Computer Science 2023-10-23 Yusheng Huang , Zhouhan Lin

Successful biomedical relation extraction can provide evidence to researchers and clinicians about possible unknown associations between biomedical entities, advancing the current knowledge we have about those entities and their inherent…

Information Retrieval · Computer Science 2020-04-22 Diana Sousa , Francisco M. Couto

Automatic extraction of cause-effect relationships from natural language texts is a challenging open problem in Artificial Intelligence. Most of the early attempts at its solution used manually constructed linguistic and syntactic rules on…

Artificial Intelligence · Computer Science 2016-05-26 Nabiha Asghar

Automatic relationship extraction (RE) from biomedical literature is critical for managing the vast amount of scientific knowledge produced each year. In recent years, utilizing pre-trained language models (PLMs) has become the prevalent…

Computation and Language · Computer Science 2025-11-04 Mario Sänger , Ulf Leser

Analysing the generalisation capabilities of relation extraction (RE) models is crucial for assessing whether they learn robust relational patterns or rely on spurious correlations. Our cross-dataset experiments find that RE models struggle…

Computation and Language · Computer Science 2025-12-16 Varvara Arzt , Allan Hanbury , Michael Wiegand , Gábor Recski , Terra Blevins

Cutting edge techniques developed in the general NLP domain are often subsequently applied to the high-value, data-rich biomedical domain. The past few years have seen generative language models (LMs), instruction finetuning, and few-shot…

Computation and Language · Computer Science 2025-07-28 Aviv Brokman , Ramakanth Kavuluru

With the explosive growth of biomedical literature, designing automatic tools to extract information from the literature has great significance in biomedical research. Recently, transformer-based BERT models adapted to the biomedical domain…

Computation and Language · Computer Science 2020-11-03 Peng Su , K. Vijay-Shanker

Over the last five years, research on Relation Extraction (RE) witnessed extensive progress with many new dataset releases. At the same time, setup clarity has decreased, contributing to increased difficulty of reliable empirical evaluation…

Computation and Language · Computer Science 2022-04-29 Elisa Bassignana , Barbara Plank

Relation extraction (RE) involves identifying the relations between entities from underlying content. RE serves as the foundation for many natural language processing (NLP) and information retrieval applications, such as knowledge graph…

Computation and Language · Computer Science 2024-06-25 Xiaoyan Zhao , Yang Deng , Min Yang , Lingzhi Wang , Rui Zhang , Hong Cheng , Wai Lam , Ying Shen , Ruifeng Xu

Most information extraction methods focus on binary relations expressed within single sentences. In high-value domains, however, $n$-ary relations are of great demand (e.g., drug-gene-mutation interactions in precision oncology). Such…

Computation and Language · Computer Science 2019-06-28 Robin Jia , Cliff Wong , Hoifung Poon

Relation extraction (RE) is a standard information extraction task playing a major role in downstream applications such as knowledge discovery and question answering. Although decoder-only large language models are excelling in generative…

Computation and Language · Computer Science 2025-07-28 Yuhang Jiang , Ramakanth Kavuluru

Document-level relation extraction is a complex human process that requires logical inference to extract relationships between named entities in text. Existing approaches use graph-based neural models with words as nodes and edges as…

Computation and Language · Computer Science 2019-09-04 Fenia Christopoulou , Makoto Miwa , Sophia Ananiadou

Two distinct approaches have been proposed for relational triple extraction - pipeline and joint. Joint models, which capture interactions across triples, are the more recent development, and have been shown to outperform pipeline models…

Computation and Language · Computer Science 2023-10-03 Pratik Saini , Tapas Nayak , Indrajit Bhattacharya

Relation extraction is a critical task in the field of natural language processing with numerous real-world applications. Existing research primarily focuses on monolingual relation extraction or cross-lingual enhancement for relation…

Artificial Intelligence · Computer Science 2024-03-26 Lingxing Kong , Yougang Chu , Zheng Ma , Jianbing Zhang , Liang He , Jiajun Chen

Relation Extraction is an important sub-task of Information Extraction which has the potential of employing deep learning (DL) models with the creation of large datasets using distant supervision. In this review, we compare the…

Computation and Language · Computer Science 2017-05-11 Shantanu Kumar