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The field of computational pathology has recently seen rapid advances driven by the development of modern vision foundation models (FMs), typically trained on vast collections of pathology images. Recent studies demonstrate that increasing…

Computer Vision and Pattern Recognition · Computer Science 2025-04-08 Mikhail Karasikov , Joost van Doorn , Nicolas Känzig , Melis Erdal Cesur , Hugo Mark Horlings , Robert Berke , Fei Tang , Sebastian Otálora

Functional magnetic resonance imaging (fMRI) is an emerging neuroimaging modality that is commonly modeled as networks of Regions of Interest (ROIs) and their connections, named functional connectivity, for understanding the brain functions…

Neurons and Cognition · Quantitative Biology 2024-10-01 Haokai Zhao , Haowei Lou , Lina Yao , Yu Zhang

Existing LLMs-post-training techniques are broadly categorized into supervised fine-tuning (SFT) and reinforcement fine-tuning (RFT). Each paradigm presents a distinct trade-off: (1) SFT excels at mimicking demonstration data, but can lead…

Machine Learning · Computer Science 2026-05-18 Zeyu Huang , Tianhao Cheng , Zihan Qiu , Zili Wang , Yinghui Xu , Edoardo M. Ponti , Ivan Titov

Vision Transformers (ViT)s have shown great performance in self-supervised learning of global and local representations that can be transferred to downstream applications. Inspired by these results, we introduce a novel self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2022-03-29 Yucheng Tang , Dong Yang , Wenqi Li , Holger Roth , Bennett Landman , Daguang Xu , Vishwesh Nath , Ali Hatamizadeh

We introduce an end-to-end deep-learning framework for 3D medical image registration. In contrast to existing approaches, our framework combines two registration methods: an affine registration and a vector momentum-parameterized stationary…

Computer Vision and Pattern Recognition · Computer Science 2019-03-22 Zhengyang Shen , Xu Han , Zhenlin Xu , Marc Niethammer

Fast Fourier Transforms (FFT) are widely used to reduce memory and computational costs in deep learning. However, existing implementations, including standard FFT and real FFT (rFFT), cannot achieve true in-place computation. In particular,…

Machine Learning · Computer Science 2025-12-23 Xinyu Ding , Bangtian Liu , Siyu Liao , Zhongfeng Wang

Deep learning models for brain tumor analysis require large and diverse datasets that are often siloed across healthcare institutions due to privacy regulations. We present a federated learning framework for brain tumor localization that…

Computer Vision and Pattern Recognition · Computer Science 2026-01-22 Andrea Protani , Riccardo Taiello , Marc Molina Van Den Bosch , Luigi Serio

Supervised deep learning models for automated CTG analysis are typically constrained by narrowly curated labelled datasets and limited patient cohorts, leaving substantial volumes of physiologically informative clinical recordings untapped.…

Machine Learning · Computer Science 2026-05-06 Sheng Wong , Ravi Shankar , Beth Albert , Hao Fei , Lin Li , Imane Ben M'Barek , Manu Vatish , Gabriel Davis Jones

Test-time training (TTT) methods explicitly update the weights of a model to adapt to the specific test instance, and they have found success in a variety of settings, including most recently language modeling and reasoning. To demystify…

Machine Learning · Computer Science 2026-02-24 Halil Alperen Gozeten , M. Emrullah Ildiz , Xuechen Zhang , Mahdi Soltanolkotabi , Marco Mondelli , Samet Oymak

In this paper, we propose a Neural Radiance Fields (NeRF) based framework, referred to as Novel View Synthesis Framework (NVSF). It jointly learns the implicit neural representation of space and time-varying scene for both LiDAR and Camera.…

Computer Vision and Pattern Recognition · Computer Science 2025-06-26 Gaurav Sharma , Ravi Kothari , Josef Schmid

Unsupervised pre-training has emerged as a transformative paradigm, displaying remarkable advancements in various domains. However, the susceptibility to domain shift, where pre-training data distribution differs from fine-tuning, poses a…

Computer Vision and Pattern Recognition · Computer Science 2024-05-22 Abhiroop Talasila , Maitreya Maity , U. Deva Priyakumar

Functional connectivity (FC) derived from resting-state fMRI plays a critical role in personalized predictions such as age and cognitive performance. However, applying foundation models(FM) to fMRI data remains challenging due to its high…

Neurons and Cognition · Quantitative Biology 2025-08-26 Yanwen Wang , Xinglin Zhao , Yijin Song , Xiaobo Liu , Yanrong Hao , Rui Cao , Xin Wen

Magnetic Resonance Fingerprinting (MRF) methods typically rely on dictionary matching to map the temporal MRF signals to quantitative tissue parameters. These methods suffer from heavy storage and computation requirements as the dictionary…

Image and Video Processing · Electrical Eng. & Systems 2019-11-25 Dongdong Chen , Mohammad Golbabaee , Pedro A. Gomez , Marion I. Menzel , Mike E. Davies

Traditional methods for tabular classification usually rely on supervised learning from scratch, which requires extensive training data to determine model parameters. However, a novel approach called Prior-Data Fitted Networks (TabPFN) has…

Machine Learning · Computer Science 2024-06-12 Quangao Liu , Wei Yang , Chen Liang , Longlong Pang , Zhuozhang Zou

Self-supervised prediction is a powerful mechanism to learn representations that capture the underlying structure of the data. Despite recent progress, the self-supervised video prediction task is still challenging. One of the critical…

Computer Vision and Pattern Recognition · Computer Science 2020-04-21 Hafez Farazi , Sven Behnke

Mid-InfraRed spectroscopy is a promising label-free technique that can offer insights into morphological and pathological alterations in biological tissues at the molecular level. Owing to the development of the Fourier Transform InfraRed…

Optics · Physics 2026-04-21 Xiangyu Zhao , Yudong Tian , Jingzhu Shao , Chongzhao Wu

Machine learning analysis of longitudinal neuroimaging data is typically based on supervised learning, which requires a large number of ground-truth labels to be informative. As ground-truth labels are often missing or expensive to obtain…

Machine Learning · Computer Science 2021-06-29 Qingyu Zhao , Zixuan Liu , Ehsan Adeli , Kilian M. Pohl

Fourier transform spectroscopy (FTS) has been widely used as an analytical tool for many applications in science and engineering. In this paper, we describe the operation principle and practical implementation of an FTS prototype. First,…

Instrumentation and Detectors · Physics 2023-02-02 Sohrab Sheikh-Sofla , Mohammad Neshat

Non-negative Matrix Factorization (NMF) is a powerful technique for analyzing regularly-sampled data, i.e., data that can be stored in a matrix. For audio, this has led to numerous applications using time-frequency (TF) representations like…

Audio and Speech Processing · Electrical Eng. & Systems 2025-07-10 Krishna Subramani , Paris Smaragdis , Takuya Higuchi , Mehrez Souden

Existing fine-tuning methods either tune all parameters of the pre-trained model (full fine-tuning), which is not efficient, or only tune the last linear layer (linear probing), which suffers a significant accuracy drop compared to the full…

Computer Vision and Pattern Recognition · Computer Science 2023-01-18 Dongze Lian , Daquan Zhou , Jiashi Feng , Xinchao Wang
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