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Anthropogenic activity threatens biodiversity through climate change, habitat fragmentation, and increasing frequency and scale of disturbance. Various theoretical studies have sought to shed light on how these factors could promote or…

Populations and Evolution · Quantitative Biology 2026-04-01 Isaac Planas-Sitjà , Ryosuke Iritani , Adam L. Cronin

Both community ecology and conservation biology seek further understanding of factors governing the advance of an invasive species. We model biological invasion as an individual-based, stochastic process on a two-dimensional landscape. An…

Populations and Evolution · Quantitative Biology 2010-07-12 Lauren O'Malley , G. Korniss , Thomas Caraco

Predators often consume multiple prey and by mutually subsidizing a shared predator, the prey may reciprocally harm each other. When predation levels are high, this apparent competition can culminate in a prey species being displaced.…

Populations and Evolution · Quantitative Biology 2019-02-12 Sebastian J. Schreiber , Swati Patel

Despite the general acknowledgment of the role of niche and fitness differences in community dynamics, species abundance has been coined as a relevant feature not just regarding niche perspectives, but also according to neutral…

Populations and Evolution · Quantitative Biology 2013-11-08 Rafael D Guariento

Over the past century, nonlinear difference and differential equations have been used to understand conditions for species coexistence. However, these models fail to account for random fluctuations due to demographic and environmental…

Populations and Evolution · Quantitative Biology 2019-02-12 Sebastian J. Schreiber

We show how highly-diverse ecological communities may display persistent abundance fluctuations, when interacting through resource competition and subjected to migration from a species pool. This turns out to be closely related to the ratio…

Statistical Mechanics · Physics 2020-02-12 Itay Dalmedigos , Guy Bunin

An organism that is newly introduced into an existing population has a survival probability that is dependent on both the population density of its environment and the competition it experiences with the members of that population.…

Populations and Evolution · Quantitative Biology 2024-12-17 Jason M. Gray , Rowan J. Barker-Clarke , Jacob G. Scott , Michael Hinczewski

We investigate species-rich mathematical models of ecosystems. While much of the existing literature focuses on the properties of equilibrium fixed points, persistent dynamics (e.g., limit cycles or chaos) have also been observed, both in…

Adaptation and Self-Organizing Systems · Physics 2025-09-10 Robin Delabays , Philippe Jacquod

Does an ecological community allow stable coexistence? Identifying the general principles that determine the answer to this question is a central problem of theoretical ecology. Random matrix theory approaches have uncovered the general…

Populations and Evolution · Quantitative Biology 2025-12-12 Yu Meng , Szabolcs Horvát , Carl D. Modes , Pierre A. Haas

Ecological trade-offs between species are often invoked to explain species coexistence in ecological communities. However, few mathematical models have been proposed for which coexistence conditions can be characterized explicitly in terms…

Populations and Evolution · Quantitative Biology 2013-05-21 Bart Haegeman , Tewfik Sari , Rampal S. Etienne

A novel mathematical framework is proposed to describe the ecological and evolutionary consequences of consumer--resource interactions. Both the consumer and resource are assumed to consist of several (sub)species, which interact between…

Populations and Evolution · Quantitative Biology 2025-11-11 Alexander S. Bratus , Sergei V. Drozhzhin , Artem S. Novozhilov

Competition between species and genotypes is a dominant factor in a variety of ecological and evolutionary processes. Biological dynamics are typically highly stochastic, and therefore, analyzing a competitive system requires accounting for…

Populations and Evolution · Quantitative Biology 2025-01-09 Ori Turkia , Nadav M. Shnerb

Species coexistence is one of the central themes in modern ecology. Coexistence is a prerequisite of biological diversity. However, the question arises how biodiversity can be reconciled with the statement of competition theory, which…

Populations and Evolution · Quantitative Biology 2007-08-17 Dalius Balciunas

Preserving biodiversity and ecosystem stability is a challenge that can be pursued through modern statistical mechanics modeling. Here we introduce a variational maximum entropy-based algorithm to evaluate the entropy in a minimal ecosystem…

Biological Physics · Physics 2018-10-17 Mattia Miotto , Lorenzo Monacelli

Biodiversity conservation becoming increasingly urgent. It is important to find mechanisms of competitive coexistence of species with different fitness in especially difficult circumstances - on one limiting resource, in isolated stable…

Populations and Evolution · Quantitative Biology 2015-03-13 Lev V. Kalmykov , Vyacheslav L. Kalmykov

The abundance of a species' population in an ecosystem is rarely stationary, often exhibiting large fluctuations over time. Using historical data on marine species, we show that the year-to-year fluctuations of population growth rate obey a…

Adaptation and Self-Organizing Systems · Physics 2015-06-02 Jie Sun , Sean P. Cornelius , John Janssen , Kimberly A. Gray , Adilson E. Motter

We address a novel approach for stochastic individual-based modelling of a single species population. Individuals are distinguished by their remaining lifetimes, which are regulated by the interplay between the inexorable running of time…

Populations and Evolution · Quantitative Biology 2021-01-08 Luis R. T. Neves , Leonardo Paulo Maia

Ecosystems dynamics is often considered as driven by a coupling of species' resource consumption and its population size dynamics. Such resource-population dynamics is captured by MacArthur-type models. One biologically relevant feature…

Populations and Evolution · Quantitative Biology 2023-07-10 Elena Bellavere , Christian H. S. Hamster , Joshua A. Dijksman

Natural ecosystems, in particular on the microbial scale, are inhabited by a large number of species. The population size of each species is affected by interactions of individuals with each other and by spatial and temporal changes in…

Populations and Evolution · Quantitative Biology 2023-06-23 Tom Burkart , Jan Willeke , Erwin Frey

We compare and contrast the long-time dynamical properties of two individual-based models of biological coevolution. Selection occurs via multispecies, stochastic population dynamics with reproduction probabilities that depend nonlinearly…

Populations and Evolution · Quantitative Biology 2011-11-10 Per Arne Rikvold